RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ANKRD13AQ8IZ07 590 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 WRNIP1Q96S55 665 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 MCM9Q9NXL9 1143 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 ZNF112Q9UJU3 913 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 TBC1D12O60347 775 aa29.79■■■□□ 2.36
USP48-214ENST00000532737 MAP2K2P36507 400 aa29.79■■■□□ 2.36
USP48-214ENST00000532737 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.79■■■□□ 2.36
USP48-214ENST00000532737 UNCXA6NJT0 531 aa29.78■■■□□ 2.36
USP48-214ENST00000532737 GSG1L2A8MUP6 293 aa29.78■■■□□ 2.36
USP48-214ENST00000532737 PHF20L1A8MW92 1017 aa29.78■■■□□ 2.36
USP48-214ENST00000532737 INPP5BP32019 993 aa29.78■■■□□ 2.36
USP48-214ENST00000532737 FOXP4Q8IVH2 680 aaPredicted RBP29.78■■■□□ 2.36
USP48-214ENST00000532737 FAM155AB1AL88 458 aaPredicted RBP29.77■■■□□ 2.36
USP48-214ENST00000532737 HLA-DOAP06340 250 aa29.77■■■□□ 2.36
USP48-214ENST00000532737 GNAT2P19087 354 aa29.77■■■□□ 2.36
USP48-214ENST00000532737 PLCD1P51178 756 aa29.77■■■□□ 2.36
USP48-214ENST00000532737 MCMDC2Q4G0Z9 681 aa29.77■■■□□ 2.36
USP48-214ENST00000532737 TTC6Q86TZ1 520 aa29.77■■■□□ 2.36
USP48-214ENST00000532737 ZKSCAN4Q969J2 545 aaPredicted RBP29.77■■■□□ 2.36
USP48-214ENST00000532737 SLC10A4Q96EP9 437 aa29.77■■■□□ 2.36
USP48-214ENST00000532737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.77■■■□□ 2.36
USP48-214ENST00000532737 DIAPH3Q9NSV4 1193 aa29.77■■■□□ 2.36
USP48-214ENST00000532737 POLR3DP05423 398 aaPredicted RBP29.76■■■□□ 2.35
USP48-214ENST00000532737 CYP2D6P10635 497 aa29.76■■■□□ 2.35
USP48-214ENST00000532737 EVX2Q03828 476 aa29.76■■■□□ 2.35
USP48-214ENST00000532737 VGLL4Q14135 290 aa29.76■■■□□ 2.35
USP48-214ENST00000532737 METTL16Q86W50 562 aaKnown RBP29.76■■■□□ 2.35
USP48-214ENST00000532737 RASAL3Q86YV0 1011 aa29.76■■■□□ 2.35
USP48-214ENST00000532737 CCDC102AQ96A19 550 aa29.76■■■□□ 2.35
USP48-214ENST00000532737 HERC5Q9UII4 1024 aaKnown RBP29.76■■■□□ 2.35
USP48-214ENST00000532737 HIP1O00291 1037 aa29.75■■■□□ 2.35
USP48-214ENST00000532737 SLC10A3P09131 477 aa29.75■■■□□ 2.35
USP48-214ENST00000532737 BEGAINQ9BUH8 593 aa29.75■■■□□ 2.35
USP48-214ENST00000532737 DNAJC18Q9H819 358 aa29.75■■■□□ 2.35
USP48-214ENST00000532737 ELP3Q9H9T3 547 aa29.75■■■□□ 2.35
USP48-214ENST00000532737 CASP8AP2Q9UKL3 1982 aa29.74■■■□□ 2.35
USP48-214ENST00000532737 PATL2C9JE40 543 aaKnown RBP29.74■■■□□ 2.35
USP48-214ENST00000532737 USP17L12C9JPN9 530 aa29.74■■■□□ 2.35
USP48-214ENST00000532737 USP17L21D6R901 530 aa29.74■■■□□ 2.35
USP48-214ENST00000532737 CWC27Q6UX04 472 aaKnown RBP29.74■■■□□ 2.35
USP48-214ENST00000532737 DDRGK1Q96HY6 314 aa29.74■■■□□ 2.35
USP48-214ENST00000532737 EPB41L4AQ9HCS5 686 aaPredicted RBP29.74■■■□□ 2.35
USP48-214ENST00000532737 CSADQ9Y600 493 aa29.74■■■□□ 2.35
USP48-214ENST00000532737 SNCAIPQ9Y6H5 919 aa29.74■■■□□ 2.35
USP48-214ENST00000532737 APPP05067 770 aa29.73■■■□□ 2.35
USP48-214ENST00000532737 RRP1BQ14684 758 aaKnown RBP29.73■■■□□ 2.35
USP48-214ENST00000532737 GIMAP6Q6P9H5 292 aa29.73■■■□□ 2.35
USP48-214ENST00000532737 ZNF589Q86UQ0 364 aaPredicted RBP29.73■■■□□ 2.35
USP48-214ENST00000532737 CRACR2BQ8N4Y2 399 aaPredicted RBP29.73■■■□□ 2.35
USP48-214ENST00000532737 EHD4Q9H223 541 aa29.73■■■□□ 2.35
USP48-214ENST00000532737 SIPA1L1O43166 1804 aa29.73■■■□□ 2.35
USP48-214ENST00000532737 MYH1P12882 1939 aa29.73■■■□□ 2.35
USP48-214ENST00000532737 DDX60LQ5H9U9 1706 aaKnown RBP29.72■■■□□ 2.35
USP48-214ENST00000532737 CYP2D7A0A087X1C5 515 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 SMIM22K7EJ46 135 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 FOXP2O15409 715 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 BMP2KLQ5H9B9 411 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 VPS53Q5VIR6 699 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 CTR9Q6PD62 1173 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 ZIC5Q96T25 663 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 SERPINB13Q9UIV8 391 aa29.72■■■□□ 2.35
USP48-214ENST00000532737 C12orf60Q5U649 245 aa29.71■■■□□ 2.35
USP48-214ENST00000532737 IFNL3Q8IZI9 196 aa29.71■■■□□ 2.35
USP48-214ENST00000532737 CNKSR2Q8WXI2 1034 aa29.71■■■□□ 2.35
USP48-214ENST00000532737 ABHD8Q96I13 439 aa29.71■■■□□ 2.35
USP48-214ENST00000532737 TRIM34Q9BYJ4 488 aa29.71■■■□□ 2.35
USP48-214ENST00000532737 TSKSQ9UJT2 592 aa29.71■■■□□ 2.35
USP48-214ENST00000532737 NAV1Q8NEY1 1877 aa29.71■■■□□ 2.35
USP48-214ENST00000532737 OTOFQ9HC10 1997 aa29.7■■■□□ 2.35
USP48-214ENST00000532737 CHMLP26374 656 aa29.7■■■□□ 2.35
USP48-214ENST00000532737 GABPAQ06546 454 aa29.7■■■□□ 2.35
USP48-214ENST00000532737 MKRN3Q13064 507 aaKnown RBP29.7■■■□□ 2.35
USP48-214ENST00000532737 NOL9Q5SY16 702 aaKnown RBP29.7■■■□□ 2.35
USP48-214ENST00000532737 SPRYD7Q5W111 196 aa29.7■■■□□ 2.35
USP48-214ENST00000532737 WNK4Q96J92 1243 aa29.7■■■□□ 2.35
USP48-214ENST00000532737 CCDC171Q6TFL3 1326 aa29.7■■■□□ 2.34
USP48-214ENST00000532737 CTNND1O60716 968 aaKnown RBP29.69■■■□□ 2.34
USP48-214ENST00000532737 GJA5P36382 358 aa29.69■■■□□ 2.34
USP48-214ENST00000532737 NOGQ13253 232 aa29.69■■■□□ 2.34
USP48-214ENST00000532737 SBK1Q52WX2 424 aa29.69■■■□□ 2.34
USP48-214ENST00000532737 TDO2P48775 406 aa29.68■■■□□ 2.34
USP48-214ENST00000532737 SCYL3Q8IZE3 742 aa29.68■■■□□ 2.34
USP48-214ENST00000532737 OPTNQ96CV9 577 aa29.68■■■□□ 2.34
USP48-214ENST00000532737 DYNLL2Q96FJ2 89 aa29.68■■■□□ 2.34
USP48-214ENST00000532737 NACAP1Q9BZK3 213 aa29.68■■■□□ 2.34
USP48-214ENST00000532737 ARPP21Q9UBL0 812 aaPredicted RBP29.68■■■□□ 2.34
USP48-214ENST00000532737 SPDYE5A6NIY4 337 aa29.67■■■□□ 2.34
USP48-214ENST00000532737 CAP2P40123 477 aa29.67■■■□□ 2.34
USP48-214ENST00000532737 KIF23Q02241 960 aaPredicted RBP29.67■■■□□ 2.34
USP48-214ENST00000532737 ERO1BQ86YB8 467 aa29.67■■■□□ 2.34
USP48-214ENST00000532737 AMOTL1Q8IY63 956 aa29.67■■■□□ 2.34
USP48-214ENST00000532737 IL25Q9H293 177 aa29.67■■■□□ 2.34
USP48-214ENST00000532737 BAZ2AQ9UIF9 1905 aaKnown RBP29.67■■■□□ 2.34
USP48-214ENST00000532737 CA12O43570 354 aa29.66■■■□□ 2.34
USP48-214ENST00000532737 JAG1P78504 1218 aa29.66■■■□□ 2.34
USP48-214ENST00000532737 TATDN1Q6P1N9 297 aa29.66■■■□□ 2.34
USP48-214ENST00000532737 MINDY4BA8MYZ0 360 aa29.65■■■□□ 2.34
USP48-214ENST00000532737 HSPD1P10809 573 aaKnown RBP29.65■■■□□ 2.34
USP48-214ENST00000532737 SHMT1P34896 483 aa29.65■■■□□ 2.34
USP48-214ENST00000532737 SLC44A5Q8NCS7 719 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms