RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 DDX60LQ5H9U9 1706 aaKnown RBP9.63□□□□□ -0.87
TRIM49-202ENST00000532501 FAM196BA6NMK8 535 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 GSG1L2A8MUP6 293 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 LDHCP07864 332 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 SHROOM1Q2M3G4 852 aaPredicted RBP9.63□□□□□ -0.87
TRIM49-202ENST00000532501 NBPF12Q5TAG4 269 aaPredicted RBP9.63□□□□□ -0.87
TRIM49-202ENST00000532501 MOB2Q70IA6 237 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 KRT26Q7Z3Y9 468 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 PNMA8AQ86V59 439 aaPredicted RBP9.63□□□□□ -0.87
TRIM49-202ENST00000532501 IDI2Q9BXS1 227 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRIM49-202ENST00000532501 DEFB129Q9H1M3 183 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 DNAJC18Q9H819 358 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 TAF6LQ9Y6J9 622 aa9.63□□□□□ -0.87
TRIM49-202ENST00000532501 ZFYP08048 801 aaPredicted RBP9.62□□□□□ -0.87
TRIM49-202ENST00000532501 PTH1RQ03431 593 aa9.62□□□□□ -0.87
TRIM49-202ENST00000532501 COL9A3Q14050 684 aaPredicted RBP9.62□□□□□ -0.87
TRIM49-202ENST00000532501 RRP1BQ14684 758 aaKnown RBP9.62□□□□□ -0.87
TRIM49-202ENST00000532501 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
TRIM49-202ENST00000532501 CDCA5Q96FF9 252 aa9.62□□□□□ -0.87
TRIM49-202ENST00000532501 OSBPL5Q9H0X9 879 aaPredicted RBP9.62□□□□□ -0.87
TRIM49-202ENST00000532501 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
TRIM49-202ENST00000532501 MYH7P12883 1935 aa9.62□□□□□ -0.87
TRIM49-202ENST00000532501 PASKQ96RG2 1323 aa9.62□□□□□ -0.87
TRIM49-202ENST00000532501 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
TRIM49-202ENST00000532501 SIPA1L1O43166 1804 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 SGSM2O43147 1006 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 ZSCAN25Q6NSZ9 544 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 APOBEC3FQ8IUX4 373 aaKnown RBP9.61□□□□□ -0.87
TRIM49-202ENST00000532501 SLF2Q8IX21 1173 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 SLC44A5Q8NCS7 719 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 AIDAQ96BJ3 306 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 ESYT1Q9BSJ8 1104 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 DIAPH3Q9NSV4 1193 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 PALD1Q9ULE6 856 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 CCDC171Q6TFL3 1326 aa9.61□□□□□ -0.87
TRIM49-202ENST00000532501 TOMM70O94826 608 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 BAG3O95817 575 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 MMP14P50281 582 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 PLCD1P51178 756 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 JAG1P78504 1218 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 HTRA3P83110 453 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 PRKG1Q13976 671 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 FKBP1CQ5VVH2 108 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 CST9Q5W186 159 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
TRIM49-202ENST00000532501 FAM151AQ8WW52 585 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 DCPSQ96C86 337 aaKnown RBP9.6□□□□□ -0.87
TRIM49-202ENST00000532501 DYNLL2Q96FJ2 89 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 NBPF3Q9H094 633 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 HELLSQ9NRZ9 838 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.6□□□□□ -0.87
TRIM49-202ENST00000532501 SLC4A4Q9Y6R1 1079 aa9.6□□□□□ -0.87
TRIM49-202ENST00000532501 CDK5RAP2Q96SN8 1893 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 POLR2AP24928 1970 aaKnown RBP9.59□□□□□ -0.87
TRIM49-202ENST00000532501 IGSF3O75054 1194 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 ENTPD3O75355 529 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 CDC45O75419 566 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 HSPD1P10809 573 aaKnown RBP9.59□□□□□ -0.87
TRIM49-202ENST00000532501 C8orf34Q49A92 452 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 MCMDC2Q4G0Z9 681 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 CDC37L1Q7L3B6 337 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 MIGA2Q7L4E1 593 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 FAM83AQ86UY5 434 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 SULF1Q8IWU6 871 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
TRIM49-202ENST00000532501 LSG1Q9H089 658 aaKnown RBP9.59□□□□□ -0.87
TRIM49-202ENST00000532501 ZNF408Q9H9D4 720 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
TRIM49-202ENST00000532501 USP17L12C9JPN9 530 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 USP17L21D6R901 530 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 MYO1BO43795 1136 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 USP5P45974 858 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 GABPAQ06546 454 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 PDAP1Q13442 181 aaKnown RBP9.58□□□□□ -0.88
TRIM49-202ENST00000532501 ECM29Q5VYK3 1845 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 CTR9Q6PD62 1173 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 CCDC84Q86UT8 332 aaPredicted RBP9.58□□□□□ -0.88
TRIM49-202ENST00000532501 IFNL3Q8IZI9 196 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 STK11IPQ8N1F8 1099 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 SMC1BQ8NDV3 1235 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 MCM9Q9NXL9 1143 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 TMOD2Q9NZR1 351 aa9.58□□□□□ -0.88
TRIM49-202ENST00000532501 COL2A1P02458 1487 aaPredicted RBP9.57□□□□□ -0.88
TRIM49-202ENST00000532501 RAD50Q92878 1312 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 CELF2O95319 508 aaKnown RBP9.57□□□□□ -0.88
TRIM49-202ENST00000532501 FGAP02671 866 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 HSPA6P17066 643 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 INPP5BP32019 993 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 HAND2P61296 217 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 GSE1Q14687 1217 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 TMED8Q6PL24 325 aaPredicted RBP9.57□□□□□ -0.88
TRIM49-202ENST00000532501 TBC1D10CQ8IV04 446 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 CLMNQ96JQ2 1002 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 CSRNP1Q96S65 589 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 NOL10Q9BSC4 688 aaKnown RBP9.57□□□□□ -0.88
TRIM49-202ENST00000532501 NAV1Q8NEY1 1877 aa9.57□□□□□ -0.88
TRIM49-202ENST00000532501 AK9Q5TCS8 1911 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 PHF20L1A8MW92 1017 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms