RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-209ENST00000532445 RAB11FIP3O75154 756 aa28.26■■■□□ 2.11
NCAPD3-209ENST00000532445 IFIT2P09913 472 aaKnown RBP28.26■■■□□ 2.11
NCAPD3-209ENST00000532445 SLURP2P0DP57 97 aa28.26■■■□□ 2.11
NCAPD3-209ENST00000532445 MAP3K12Q12852 859 aa28.26■■■□□ 2.11
NCAPD3-209ENST00000532445 TGFBRAP1Q8WUH2 860 aa28.26■■■□□ 2.11
NCAPD3-209ENST00000532445 PARK7Q99497 189 aaKnown RBP28.26■■■□□ 2.11
NCAPD3-209ENST00000532445 TRIM34Q9BYJ4 488 aa28.26■■■□□ 2.11
NCAPD3-209ENST00000532445 FLT1P17948 1338 aa28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 A0A0G2JLL6 359 aaPredicted RBP28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 TMED8Q6PL24 325 aaPredicted RBP28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 GADL1Q6ZQY3 521 aa28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 PRRT2Q7Z6L0 340 aaPredicted RBP28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 MAPKAPK5Q8IW41 473 aa28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 PI4KBQ9UBF8 816 aa28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 AFG3L2Q9Y4W6 797 aa28.25■■■□□ 2.11
NCAPD3-209ENST00000532445 LACTBP83111 547 aaPredicted RBP28.24■■■□□ 2.11
NCAPD3-209ENST00000532445 TTF1Q15361 905 aaPredicted RBP28.24■■■□□ 2.11
NCAPD3-209ENST00000532445 MAGEB6Q8N7X4 407 aa28.24■■■□□ 2.11
NCAPD3-209ENST00000532445 BCL11AQ9H165 835 aa28.24■■■□□ 2.11
NCAPD3-209ENST00000532445 NDUFB9Q9Y6M9 179 aa28.24■■■□□ 2.11
NCAPD3-209ENST00000532445 MOGSQ13724 837 aa28.23■■■□□ 2.11
NCAPD3-209ENST00000532445 SIRT2Q8IXJ6 389 aa28.23■■■□□ 2.11
NCAPD3-209ENST00000532445 TBC1D2Q9BYX2 928 aa28.23■■■□□ 2.11
NCAPD3-209ENST00000532445 CPA4Q9UI42 421 aa28.23■■■□□ 2.11
NCAPD3-209ENST00000532445 TRIM75PA6NK02 468 aa28.22■■■□□ 2.11
NCAPD3-209ENST00000532445 HLA-DOAP06340 250 aa28.22■■■□□ 2.11
NCAPD3-209ENST00000532445 DDX60LQ5H9U9 1706 aaKnown RBP28.22■■■□□ 2.11
NCAPD3-209ENST00000532445 C20orf194Q5TEA3 1177 aa28.22■■■□□ 2.11
NCAPD3-209ENST00000532445 CRACR2BQ8N4Y2 399 aaPredicted RBP28.22■■■□□ 2.11
NCAPD3-209ENST00000532445 ANTXR1Q9H6X2 564 aa28.22■■■□□ 2.11
NCAPD3-209ENST00000532445 GNRH1P01148 92 aa28.21■■■□□ 2.11
NCAPD3-209ENST00000532445 C17orf99Q6UX52 265 aa28.21■■■□□ 2.11
NCAPD3-209ENST00000532445 MIGA1Q8NAN2 632 aa28.21■■■□□ 2.11
NCAPD3-209ENST00000532445 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.21■■■□□ 2.11
NCAPD3-209ENST00000532445 MYH8P13535 1937 aa28.21■■■□□ 2.11
NCAPD3-209ENST00000532445 ADGRA2Q96PE1 1338 aa28.2■■■□□ 2.11
NCAPD3-209ENST00000532445 CAP2P40123 477 aa28.2■■■□□ 2.1
NCAPD3-209ENST00000532445 DYNLL1P63167 89 aaKnown RBP28.2■■■□□ 2.1
NCAPD3-209ENST00000532445 CAP1Q01518 475 aa28.2■■■□□ 2.1
NCAPD3-209ENST00000532445 GPAT2Q6NUI2 795 aa28.2■■■□□ 2.1
NCAPD3-209ENST00000532445 SLC45A1Q9Y2W3 748 aa28.2■■■□□ 2.1
NCAPD3-209ENST00000532445 USP5P45974 858 aa28.19■■■□□ 2.1
NCAPD3-209ENST00000532445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.19■■■□□ 2.1
NCAPD3-209ENST00000532445 AS3MTQ9HBK9 375 aa28.19■■■□□ 2.1
NCAPD3-209ENST00000532445 SLC9C1Q4G0N8 1177 aa28.18■■■□□ 2.1
NCAPD3-209ENST00000532445 CCDC84Q86UT8 332 aaPredicted RBP28.18■■■□□ 2.1
NCAPD3-209ENST00000532445 DNAJC2Q99543 621 aaKnown RBP28.18■■■□□ 2.1
NCAPD3-209ENST00000532445 ARHGAP39Q9C0H5 1083 aa28.18■■■□□ 2.1
NCAPD3-209ENST00000532445 SAP30BPQ9UHR5 308 aaKnown RBP28.18■■■□□ 2.1
NCAPD3-209ENST00000532445 PALD1Q9ULE6 856 aa28.18■■■□□ 2.1
NCAPD3-209ENST00000532445 PTCH2Q9Y6C5 1203 aa28.18■■■□□ 2.1
NCAPD3-209ENST00000532445 USP17L5A8MUK1 530 aa28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 CYP2C8P10632 490 aa28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 PRMT2P55345 433 aa28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 NBPF11Q86T75 865 aa28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 FOXP4Q8IVH2 680 aaPredicted RBP28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 ZNF280CQ8ND82 737 aa28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 ARMC5Q96C12 935 aa28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 AGTPBP1Q9UPW5 1226 aa28.17■■■□□ 2.1
NCAPD3-209ENST00000532445 PROCA1Q8NCQ7 364 aaPredicted RBP28.16■■■□□ 2.1
NCAPD3-209ENST00000532445 SMCR8Q8TEV9 937 aaPredicted RBP28.16■■■□□ 2.1
NCAPD3-209ENST00000532445 PNMA3Q9UL41 463 aa28.16■■■□□ 2.1
NCAPD3-209ENST00000532445 GOLIM4O00461 696 aa28.15■■■□□ 2.1
NCAPD3-209ENST00000532445 ECM2O94769 699 aaPredicted RBP28.15■■■□□ 2.1
NCAPD3-209ENST00000532445 ASNSP08243 561 aa28.15■■■□□ 2.1
NCAPD3-209ENST00000532445 SPP2Q13103 211 aa28.15■■■□□ 2.1
NCAPD3-209ENST00000532445 LRRCC1Q9C099 1032 aa28.15■■■□□ 2.1
NCAPD3-209ENST00000532445 FMNL1O95466 1100 aaPredicted RBP28.14■■■□□ 2.1
NCAPD3-209ENST00000532445 HOXD10P28358 340 aa28.14■■■□□ 2.1
NCAPD3-209ENST00000532445 PSMC4P43686 418 aa28.14■■■□□ 2.1
NCAPD3-209ENST00000532445 SLC4A8Q2Y0W8 1093 aa28.14■■■□□ 2.1
NCAPD3-209ENST00000532445 SLC9C2Q5TAH2 1124 aa28.14■■■□□ 2.1
NCAPD3-209ENST00000532445 MAGEB6P1A0A0J9YX57 407 aa28.13■■■□□ 2.09
NCAPD3-209ENST00000532445 PABPC4Q13310 644 aaKnown RBP eCLIP28.13■■■□□ 2.09
NCAPD3-209ENST00000532445 METTL16Q86W50 562 aaKnown RBP28.13■■■□□ 2.09
NCAPD3-209ENST00000532445 DNAJC18Q9H819 358 aa28.13■■■□□ 2.09
NCAPD3-209ENST00000532445 GINM1Q9NU53 330 aa28.13■■■□□ 2.09
NCAPD3-209ENST00000532445 BCRP11274 1271 aa28.12■■■□□ 2.09
NCAPD3-209ENST00000532445 PDE6AP16499 860 aa28.12■■■□□ 2.09
NCAPD3-209ENST00000532445 FCGRTP55899 365 aa28.12■■■□□ 2.09
NCAPD3-209ENST00000532445 RRP1BQ14684 758 aaKnown RBP28.12■■■□□ 2.09
NCAPD3-209ENST00000532445 HMGCS2P54868 508 aa28.11■■■□□ 2.09
NCAPD3-209ENST00000532445 TRIM47Q96LD4 638 aa28.11■■■□□ 2.09
NCAPD3-209ENST00000532445 TMEM106CQ9BVX2 250 aa28.11■■■□□ 2.09
NCAPD3-209ENST00000532445 PAG1Q9NWQ8 432 aa28.11■■■□□ 2.09
NCAPD3-209ENST00000532445 BAZ2AQ9UIF9 1905 aaKnown RBP28.11■■■□□ 2.09
NCAPD3-209ENST00000532445 TREML2Q5T2D2 321 aa28.1■■■□□ 2.09
NCAPD3-209ENST00000532445 TTC6Q86TZ1 520 aa28.1■■■□□ 2.09
NCAPD3-209ENST00000532445 ZNF333Q96JL9 665 aa28.1■■■□□ 2.09
NCAPD3-209ENST00000532445 CRNKL1Q9BZJ0 848 aaKnown RBP28.1■■■□□ 2.09
NCAPD3-209ENST00000532445 SRRDQ9UH36 339 aa28.1■■■□□ 2.09
NCAPD3-209ENST00000532445 MYPNQ86TC9 1320 aa28.1■■■□□ 2.09
NCAPD3-209ENST00000532445 ZNF532Q9HCE3 1301 aa28.1■■■□□ 2.09
NCAPD3-209ENST00000532445 GDF11O95390 407 aa28.09■■■□□ 2.09
NCAPD3-209ENST00000532445 ATP5JP18859 108 aa28.09■■■□□ 2.09
NCAPD3-209ENST00000532445 RIOK1Q9BRS2 568 aaKnown RBP28.09■■■□□ 2.09
NCAPD3-209ENST00000532445 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.09■■■□□ 2.09
NCAPD3-209ENST00000532445 EHD4Q9H223 541 aa28.09■■■□□ 2.09
NCAPD3-209ENST00000532445 BOLA2Q9H3K6 86 aa28.09■■■□□ 2.09
NCAPD3-209ENST00000532445 SERPINB13Q9UIV8 391 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms