RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 DDX19BQ9UMR2 479 aa20.16■□□□□ 0.82
CAVIN3-204ENST00000532354 PDE4DIPQ5VU43 2346 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 CENPFP49454 3210 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 TRIM75PA6NK02 468 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 BCRP11274 1271 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 CAP2P40123 477 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 SLC9C1Q4G0N8 1177 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 NBPF11Q86T75 865 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 MAPKAPK5Q8IW41 473 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 SIRT2Q8IXJ6 389 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 ZNF333Q96JL9 665 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 TRIM47Q96LD4 638 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 PI4KBQ9UBF8 816 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 SLC45A1Q9Y2W3 748 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 NDUFB9Q9Y6M9 179 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 ZSWIM8A7E2V4 1837 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 DOCK1Q14185 1865 aa20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 MYO5AQ9Y4I1 1855 aaKnown RBP20.15■□□□□ 0.82
CAVIN3-204ENST00000532354 PHIPQ8WWQ0 1821 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 MAST2Q6P0Q8 1798 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 FLT1P17948 1338 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 IDH1O75874 414 aaKnown RBP20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 ECM2O94769 699 aaPredicted RBP20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 CYP7A1P22680 504 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 PSMC4P43686 418 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 PRMT2P55345 433 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 DYNLL1P63167 89 aaKnown RBP20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 ANTXR1Q9H6X2 564 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 IL1RAPL2Q9NP60 686 aa20.14■□□□□ 0.81
CAVIN3-204ENST00000532354 PRPF38BQ5VTL8 546 aaKnown RBP20.13■□□□□ 0.81
CAVIN3-204ENST00000532354 HMMRO75330 724 aa20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 SPP2Q13103 211 aa20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 METTL16Q86W50 562 aaKnown RBP20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 FOXP4Q8IVH2 680 aaPredicted RBP20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 ZNF280CQ8ND82 737 aa20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 SRRDQ9UH36 339 aa20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 PALD1Q9ULE6 856 aa20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 AGTPBP1Q9UPW5 1226 aa20.12■□□□□ 0.81
CAVIN3-204ENST00000532354 USP17L5A8MUK1 530 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 FMNL1O95466 1100 aaPredicted RBP20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 EN2P19622 333 aaPredicted RBP20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 OSBPP22059 807 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 MAGEB6Q8N7X4 407 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 SH3TC2Q8TF17 1288 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 KIF1BPQ96EK5 621 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 TMEM106CQ9BVX2 250 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 TBC1D2Q9BYX2 928 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 DNAJC18Q9H819 358 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 PTPRFP10586 1907 aa20.11■□□□□ 0.81
CAVIN3-204ENST00000532354 KIAA0100Q14667 2235 aaKnown RBP20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 APBB1O00213 710 aa20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 HOXD10P28358 340 aa20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 JAG1P78504 1218 aa20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 MAP3K12Q12852 859 aa20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 TREML2Q5T2D2 321 aa20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 CLASRPQ8N2M8 674 aaKnown RBP20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 MIGA1Q8NAN2 632 aa20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 PROCA1Q8NCQ7 364 aaPredicted RBP20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 CHMP4BQ9H444 224 aaKnown RBP20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 PCDH10Q9P2E7 1040 aa20.1■□□□□ 0.81
CAVIN3-204ENST00000532354 SIPA1L1O43166 1804 aa20.09■□□□□ 0.81
CAVIN3-204ENST00000532354 C20orf194Q5TEA3 1177 aa20.09■□□□□ 0.81
CAVIN3-204ENST00000532354 TMED8Q6PL24 325 aaPredicted RBP20.09■□□□□ 0.81
CAVIN3-204ENST00000532354 CERS3Q8IU89 383 aa20.09■□□□□ 0.81
CAVIN3-204ENST00000532354 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
CAVIN3-204ENST00000532354 CDK5RAP2Q96SN8 1893 aa20.09■□□□□ 0.81
CAVIN3-204ENST00000532354 RBBP6Q7Z6E9 1792 aaKnown RBP20.08■□□□□ 0.81
CAVIN3-204ENST00000532354 RAB11FIP3O75154 756 aa20.08■□□□□ 0.81
CAVIN3-204ENST00000532354 HMGCS2P54868 508 aa20.08■□□□□ 0.81
CAVIN3-204ENST00000532354 FCGRTP55899 365 aa20.08■□□□□ 0.81
CAVIN3-204ENST00000532354 SH3D19Q5HYK7 790 aa20.08■□□□□ 0.81
CAVIN3-204ENST00000532354 CRACR2BQ8N4Y2 399 aaPredicted RBP20.08■□□□□ 0.81
CAVIN3-204ENST00000532354 AS3MTQ9HBK9 375 aa20.08■□□□□ 0.81
CAVIN3-204ENST00000532354 FOCADQ5VW36 1801 aa20.08■□□□□ 0.8
CAVIN3-204ENST00000532354 MYPNQ86TC9 1320 aa20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 MYCP01106 439 aaPredicted RBP20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 HLA-DOAP06340 250 aa20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 ASNSP08243 561 aa20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 IFIT2P09913 472 aaKnown RBP20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 SMCR8Q8TEV9 937 aaPredicted RBP20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 WDR18Q9BV38 432 aa20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 TRIM34Q9BYJ4 488 aa20.07■□□□□ 0.8
CAVIN3-204ENST00000532354 BRCA2P51587 3418 aa20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 USP5P45974 858 aa20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 PRKCZQ05513 592 aa20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 TTF1Q15361 905 aaPredicted RBP20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 SHROOM1Q2M3G4 852 aaPredicted RBP20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 RAET1EQ8TD07 263 aa20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 RIOK1Q9BRS2 568 aaKnown RBP20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 GINM1Q9NU53 330 aa20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 ATAD5Q96QE3 1844 aa20.06■□□□□ 0.8
CAVIN3-204ENST00000532354 GRK4P32298 578 aa20.05■□□□□ 0.8
CAVIN3-204ENST00000532354 BACE1P56817 501 aa20.05■□□□□ 0.8
CAVIN3-204ENST00000532354 PNMA3Q9UL41 463 aa20.05■□□□□ 0.8
CAVIN3-204ENST00000532354 GABRQQ9UN88 632 aa20.05■□□□□ 0.8
CAVIN3-204ENST00000532354 GDF11O95390 407 aa20.04■□□□□ 0.8
CAVIN3-204ENST00000532354 PABPC4Q13310 644 aaKnown RBP eCLIP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms