RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 AKAP2Q9Y2D5 859 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 FAM205AQ6ZU69 1335 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 SCAMP3O14828 347 aaKnown RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 SURF6O75683 361 aaKnown RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 ITGBL1O95965 494 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 MMP14P50281 582 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 FKBP1AP62942 108 aaKnown RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 TFCP2Q12800 502 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 CHAF1AQ13111 956 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 OS9Q13438 667 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 CEP85Q6P2H3 762 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 GIMAP6Q6P9H5 292 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L2Q6R6M4 530 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 DCPSQ96C86 337 aaKnown RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 ZBTB40Q9NUA8 1239 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 GNL3LQ9NVN8 582 aaKnown RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 CUEDC1Q9NWM3 386 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 PGAP2Q9UHJ9 254 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 HDAC9Q9UKV0 1011 aa7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 IQSEC3Q9UPP2 1182 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P42-201ENST00000532126 PASKQ96RG2 1323 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 A0A1B0GUL7 405 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L15C9J2P7 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L10C9JJH3 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L13C9JLJ4 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L12C9JPN9 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L11C9JVI0 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L21D6R901 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L18D6R9N7 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L22D6RA61 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L17D6RBQ6 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L19D6RCP7 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L20D6RJB6 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 F8W031 263 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 RRP1P56182 461 aaKnown RBP7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 TIMM10P62072 90 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 HTRA3P83110 453 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 USP17L24Q0WX57 530 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 MTMR2Q13614 643 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 SCARF1Q14162 830 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 SWI5Q1ZZU3 235 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 MFSD14BQ5SR56 506 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 RPAP2Q8IXW5 612 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 CERS5Q8N5B7 392 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 C1orf216Q8TAB5 229 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 TBC1D22AQ8WUA7 517 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 NEUROD6Q96NK8 337 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 GLIS2Q9BZE0 524 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 GGA3Q9NZ52 723 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 PCDHGC3Q9UN70 934 aa7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 NOP58Q9Y2X3 529 aaKnown RBP7.09□□□□□ -1.27
HMGB1P42-201ENST00000532126 ADAMTSL1Q8N6G6 1762 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 ASTN2O75129 1339 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 POTEB2H3BUK9 544 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 TRAF5O00463 557 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 HMMRO75330 724 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 ADORA1P30542 326 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 DLGAP5Q15398 846 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 GORABQ5T7V8 394 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 ANGEL2Q5VTE6 544 aaKnown RBP7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 CCDC102BQ68D86 513 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 KRT26Q7Z3Y9 468 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 USP48Q86UV5 1035 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 ERC1Q8IUD2 1116 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 RNF135Q8IUD6 432 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 SLF2Q8IX21 1173 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 XAGE2Q96GT9 111 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 ASB16Q96NS5 453 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 TANGO6Q9C0B7 1094 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 TTF2Q9UNY4 1162 aaKnown RBP7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 SCN9AQ15858 1988 aa7.08□□□□□ -1.28
HMGB1P42-201ENST00000532126 ADM5C9JUS6 153 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 WNT10BO00744 389 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 MYO1BO43795 1136 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 PHKA1P46020 1223 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 RBM5P52756 815 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 FMR1Q06787 632 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 PROX2Q3B8N5 592 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 NBPF9Q3BBW0 867 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 CFAP100Q494V2 611 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 HSP90AB4PQ58FF6 505 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 TNNI3KQ59H18 835 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 WDR66Q8TBY9 1149 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 LRRN4Q8WUT4 740 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 GPR108Q9NPR9 543 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 DENND2AQ9ULE3 1009 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 ABT1Q9ULW3 272 aaKnown RBP7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 EXOC6BQ9Y2D4 811 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 FPGT-TNNI3KV9GXZ4 949 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 A0A1B0GUL6 1792 aa7.07□□□□□ -1.28
HMGB1P42-201ENST00000532126 MAST3O60307 1309 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 PITPNM2Q9BZ72 1349 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 USP17L5A8MUK1 530 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 MARCH6O60337 910 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 CELF2O95319 508 aaKnown RBP7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 SKIP12755 728 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms