RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 AFG3L2Q9Y4W6 797 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 NDUFB9Q9Y6M9 179 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 PDHXO00330 501 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 GOLIM4O00461 696 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 IGHDP01880 384 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 USP5P45974 858 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 KIF22Q14807 665 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 SLC9C2Q5TAH2 1124 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 CD99L2Q8TCZ2 262 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 DNAJC2Q99543 621 aaKnown RBP13.31□□□□□ -0.28
CAPN1-221ENST00000531068 GINM1Q9NU53 330 aa13.31□□□□□ -0.28
CAPN1-221ENST00000531068 COL2A1P02458 1487 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-221ENST00000531068 A0A0G2JLL6 359 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-221ENST00000531068 CAP2P40123 477 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 RGS19P49795 217 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 DYNLL1P63167 89 aaKnown RBP13.3□□□□□ -0.28
CAPN1-221ENST00000531068 PRRT2Q7Z6L0 340 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-221ENST00000531068 TTC6Q86TZ1 520 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
CAPN1-221ENST00000531068 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-221ENST00000531068 MIGA1Q8NAN2 632 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 GPATCH3Q96I76 525 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 HAUS7Q99871 368 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 PALD1Q9ULE6 856 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 FLT1P17948 1338 aa13.3□□□□□ -0.28
CAPN1-221ENST00000531068 MAGEB6P1A0A0J9YX57 407 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 USP17L5A8MUK1 530 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 GNRH1P01148 92 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 PDE6AP16499 860 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-221ENST00000531068 MOGSQ13724 837 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 ZNF280CQ8ND82 737 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 PARK7Q99497 189 aaKnown RBP13.29□□□□□ -0.28
CAPN1-221ENST00000531068 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN1-221ENST00000531068 AS3MTQ9HBK9 375 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 PTPN22Q9Y2R2 807 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 SLC45A1Q9Y2W3 748 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 ECM29Q5VYK3 1845 aa13.29□□□□□ -0.28
CAPN1-221ENST00000531068 TRIM75PA6NK02 468 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 FAM196BA6NMK8 535 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 ASNSP08243 561 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 SLURP2P0DP57 97 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 SPP2Q13103 211 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 GPAT2Q6NUI2 795 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 C17orf99Q6UX52 265 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 GADL1Q6ZQY3 521 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 CRNKL1Q9BZJ0 848 aaKnown RBP13.28□□□□□ -0.28
CAPN1-221ENST00000531068 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
CAPN1-221ENST00000531068 SAP30BPQ9UHR5 308 aaKnown RBP13.28□□□□□ -0.28
CAPN1-221ENST00000531068 SMARCA5O60264 1052 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-221ENST00000531068 HOXD10P28358 340 aa13.27□□□□□ -0.29
CAPN1-221ENST00000531068 MLLT1Q03111 559 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-221ENST00000531068 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN1-221ENST00000531068 RIOK1Q9BRS2 568 aaKnown RBP13.27□□□□□ -0.29
CAPN1-221ENST00000531068 EHD4Q9H223 541 aa13.27□□□□□ -0.29
CAPN1-221ENST00000531068 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-221ENST00000531068 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
CAPN1-221ENST00000531068 ZNF532Q9HCE3 1301 aa13.27□□□□□ -0.29
CAPN1-221ENST00000531068 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-221ENST00000531068 PRMT2P55345 433 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-221ENST00000531068 UBE3CQ15386 1083 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 CENPQQ7L2Z9 268 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-221ENST00000531068 PROCA1Q8NCQ7 364 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-221ENST00000531068 WDR18Q9BV38 432 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 CPA4Q9UI42 421 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 SERPINB13Q9UIV8 391 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 AGTPBP1Q9UPW5 1226 aa13.26□□□□□ -0.29
CAPN1-221ENST00000531068 TCRBV5S4A2TA0A5A2 114 aa13.25□□□□□ -0.29
CAPN1-221ENST00000531068 C19orf81C9J6K1 198 aa13.25□□□□□ -0.29
CAPN1-221ENST00000531068 ADD2P35612 726 aa13.25□□□□□ -0.29
CAPN1-221ENST00000531068 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
CAPN1-221ENST00000531068 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
CAPN1-221ENST00000531068 EDC3Q96F86 508 aaKnown RBP13.25□□□□□ -0.29
CAPN1-221ENST00000531068 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
CAPN1-221ENST00000531068 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
CAPN1-221ENST00000531068 AKAP11Q9UKA4 1901 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 FMNL1O95466 1100 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-221ENST00000531068 CYP2C8P10632 490 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 OSBPP22059 807 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 PSMC4P43686 418 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 BACE1P56817 501 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
CAPN1-221ENST00000531068 LRRFIP1Q32MZ4 808 aaKnown RBP13.24□□□□□ -0.29
CAPN1-221ENST00000531068 SH3D19Q5HYK7 790 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 CCDC84Q86UT8 332 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-221ENST00000531068 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 SMCR8Q8TEV9 937 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-221ENST00000531068 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 DNAJC18Q9H819 358 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 CABP5Q9NP86 173 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 ATP8A2Q9NTI2 1148 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms