RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 GGA2Q9UJY4 613 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 AOX1Q06278 1338 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 MGRN1O60291 552 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 CDC25CP30307 473 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 GCLCP48506 637 aaPredicted RBP8.8□□□□□ -1
PTPRK-219ENST00000531050 NLRP12P59046 1061 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 MYO1EQ12965 1108 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 IFT88Q13099 833 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 CFAP100Q494V2 611 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 ZNF569Q5MCW4 686 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 NUP133Q8WUM0 1156 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 CCDC47Q96A33 483 aaKnown RBP8.8□□□□□ -1
PTPRK-219ENST00000531050 CCDC97Q96F63 343 aaPredicted RBP8.8□□□□□ -1
PTPRK-219ENST00000531050 RIPOR2Q9Y4F9 1068 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 SETD1BQ9UPS6 1966 aaKnown RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 GOLGA6L7A0A1B0GV03 622 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 CTAGE9A4FU28 777 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 A6NHS1 94 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 GOLGA8KD6RF30 607 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 DNM1LO00429 736 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 KIF5CO60282 957 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 PPFIA3O75145 1194 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 SERPINC1P01008 464 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 OATP04181 439 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 ALDH1B1P30837 517 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 AKAP17AQ02040 695 aaKnown RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 ATL2Q8NHH9 583 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 ZNF396Q96N95 335 aaPredicted RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 ZNF570Q96NI8 536 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 ALS2CR12Q96Q35 445 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 SELENOOQ9BVL4 669 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 GGNBP2Q9H3C7 697 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 BIN2Q9UBW5 565 aaPredicted RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 C15orf41Q9Y2V0 281 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 AGLP35573 1532 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 KDRP35968 1356 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 A6NNZ2 444 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 MYO1BO43795 1136 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 RNF8O76064 485 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 MYL1P05976 194 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 CCDC175P0C221 793 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 FERP16591 822 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 EIF2S2P20042 333 aaKnown RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 TPP2P29144 1249 aaPredicted RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 ADKP55263 362 aaKnown RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 ZBED6P86452 979 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 PTH1RQ03431 593 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 IFFO1Q0D2I5 559 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 TUBB8Q3ZCM7 444 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 FBXO31Q5XUX0 539 aaPredicted RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 CC2D2BQ6DHV5 1058 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 ARHGAP22Q7Z5H3 698 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 GSPT2Q8IYD1 628 aaKnown RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 SLC35F6Q8N357 371 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 CCDC148Q8NFR7 591 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 BRF1Q92994 677 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 SDF4Q9BRK5 362 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 EPN3Q9H201 632 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 TMEM165Q9HC07 324 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 PAPOLBQ9NRJ5 636 aaKnown RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 ADGRG1Q9Y653 693 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 U3KPZ7 1027 aaPredicted RBP8.79□□□□□ -1
PTPRK-219ENST00000531050 LRRC7Q96NW7 1537 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 DLC1Q96QB1 1528 aa8.79□□□□□ -1
PTPRK-219ENST00000531050 A0A1B0GVG6 124 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 A0A1B0GVL5 298 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 JAK2O60674 1132 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 ATP6V1G2O95670 118 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 GNAT1P11488 350 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 LSP1P33241 339 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 AMPD2Q01433 879 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 TTMPQ5BVD1 217 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 NCAPH2Q6IBW4 605 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 MTHFD1LQ6UB35 978 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 TSHZ1Q6ZSZ6 1077 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 Q6ZUG5 572 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 ARHGEF25Q86VW2 580 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 CDC5LQ99459 802 aaKnown RBP8.78□□□□□ -1
PTPRK-219ENST00000531050 NOD2Q9HC29 1040 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 CDC42BPGQ6DT37 1551 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 SPATA31D1Q6ZQQ2 1576 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 TSPOAP1O95153 1857 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 LIN7AO14910 233 aaPredicted RBP8.78□□□□□ -1
PTPRK-219ENST00000531050 EPB41P11171 864 aaKnown RBP8.78□□□□□ -1
PTPRK-219ENST00000531050 HDLBPQ00341 1268 aaKnown RBP8.78□□□□□ -1
PTPRK-219ENST00000531050 XRCC4Q13426 336 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 PDILTQ8N807 584 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 ARL8AQ96BM9 186 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 USP28Q96RU2 1077 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 OSBPL7Q9BZF2 842 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 ZCWPW1Q9H0M4 648 aa8.78□□□□□ -1
PTPRK-219ENST00000531050 ABCC6O95255 1503 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 FYB1O15117 783 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 BUB1BO60566 1050 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 RAB11FIP3O75154 756 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 ZMYND10O75800 440 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms