RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 VEZTQ9HBM0 779 aa16.49■□□□□ 0.23
NXF1-207ENST00000530875 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
NXF1-207ENST00000530875 AK2P54819 239 aa16.48■□□□□ 0.23
NXF1-207ENST00000530875 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
NXF1-207ENST00000530875 LRRC2Q9BYS8 371 aa16.48■□□□□ 0.23
NXF1-207ENST00000530875 KRT23Q9C075 422 aa16.48■□□□□ 0.23
NXF1-207ENST00000530875 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
NXF1-207ENST00000530875 KDM4AO75164 1064 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 ENTPD3O75355 529 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 FGRP09769 529 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 MCM5P33992 734 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 ANTXR2P58335 489 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
NXF1-207ENST00000530875 TTC6Q86TZ1 520 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 TRPM4Q8TD43 1214 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 SLKQ9H2G2 1235 aaPredicted RBP16.47■□□□□ 0.23
NXF1-207ENST00000530875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
NXF1-207ENST00000530875 PRC1O43663 620 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 PDE4BQ07343 736 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 CYB5R4Q7L1T6 521 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 SH3BP5LQ7L8J4 393 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 ZSCAN29Q8IWY8 852 aaPredicted RBP16.47■□□□□ 0.23
NXF1-207ENST00000530875 SLC44A5Q8NCS7 719 aa16.47■□□□□ 0.23
NXF1-207ENST00000530875 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
NXF1-207ENST00000530875 MYH1P12882 1939 aa16.46■□□□□ 0.23
NXF1-207ENST00000530875 ASTN2O75129 1339 aaPredicted RBP16.46■□□□□ 0.23
NXF1-207ENST00000530875 ZC3H4Q9UPT8 1303 aaKnown RBP16.46■□□□□ 0.23
NXF1-207ENST00000530875 DDTLA6NHG4 134 aaPredicted RBP16.46■□□□□ 0.23
NXF1-207ENST00000530875 PCP11498 1178 aaKnown RBP16.46■□□□□ 0.23
NXF1-207ENST00000530875 LMOD1P29536 600 aaPredicted RBP16.46■□□□□ 0.23
NXF1-207ENST00000530875 Q6ZUG5 572 aa16.46■□□□□ 0.23
NXF1-207ENST00000530875 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
NXF1-207ENST00000530875 ZSWIM5Q9P217 1185 aa16.46■□□□□ 0.23
NXF1-207ENST00000530875 CNTNAP1P78357 1384 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
NXF1-207ENST00000530875 ORC4O43929 436 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 HLA-DOAP06340 250 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 TOB2Q14106 344 aaPredicted RBP16.45■□□□□ 0.22
NXF1-207ENST00000530875 FKBP1CQ5VVH2 108 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 ESR2Q92731 530 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 DHX36Q9H2U1 1008 aaKnown RBP16.45■□□□□ 0.22
NXF1-207ENST00000530875 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
NXF1-207ENST00000530875 RANBP6O60518 1105 aaKnown RBP16.45■□□□□ 0.22
NXF1-207ENST00000530875 MCM2P49736 904 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 FGD1P98174 961 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 C16orf86Q6ZW13 317 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 FAM151AQ8WW52 585 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 ALDH8A1Q9H2A2 487 aaPredicted RBP16.45■□□□□ 0.22
NXF1-207ENST00000530875 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
NXF1-207ENST00000530875 GLTPD2A6NH11 291 aa16.44■□□□□ 0.22
NXF1-207ENST00000530875 CDK8P49336 464 aa16.44■□□□□ 0.22
NXF1-207ENST00000530875 HIRAP54198 1017 aaPredicted RBP16.44■□□□□ 0.22
NXF1-207ENST00000530875 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
NXF1-207ENST00000530875 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
NXF1-207ENST00000530875 HACL1Q9UJ83 578 aa16.44■□□□□ 0.22
NXF1-207ENST00000530875 ATRNL1Q5VV63 1379 aa16.44■□□□□ 0.22
NXF1-207ENST00000530875 SLURP2P0DP57 97 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 GABPAQ06546 454 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 FAM47AQ5JRC9 791 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 BRF1Q92994 677 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 L3MBTL3Q96JM7 780 aaPredicted RBP16.43■□□□□ 0.22
NXF1-207ENST00000530875 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 ADARB2Q9NS39 739 aaKnown RBP16.43■□□□□ 0.22
NXF1-207ENST00000530875 PI4KBQ9UBF8 816 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 SPRYD3Q8NCJ5 442 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 CSRNP1Q96S65 589 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 EHD4Q9H223 541 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 LIMCH1Q9UPQ0 1083 aa16.43■□□□□ 0.22
NXF1-207ENST00000530875 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
NXF1-207ENST00000530875 TNNI2P48788 182 aa16.42■□□□□ 0.22
NXF1-207ENST00000530875 ANGEL2Q5VTE6 544 aaKnown RBP16.42■□□□□ 0.22
NXF1-207ENST00000530875 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
NXF1-207ENST00000530875 TMX3Q96JJ7 454 aa16.42■□□□□ 0.22
NXF1-207ENST00000530875 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
NXF1-207ENST00000530875 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
NXF1-207ENST00000530875 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 TSPY2A6NKD2 308 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 FAM196BA6NMK8 535 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
NXF1-207ENST00000530875 RASA1P20936 1047 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 RASA3Q14644 834 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 ZNF444Q8N0Y2 327 aaPredicted RBP16.41■□□□□ 0.22
NXF1-207ENST00000530875 TMEM87BQ96K49 555 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 SWAP70Q9UH65 585 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 SH2B2O14492 632 aaPredicted RBP16.41■□□□□ 0.22
NXF1-207ENST00000530875 LARGE1O95461 756 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 TFAP4Q01664 338 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 APOBRQ0VD83 1088 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 TMEM67Q5HYA8 995 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 FBXL16Q8N461 479 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 IGDCC4Q8TDY8 1250 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 DNAJC18Q9H819 358 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms