RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 WIPI1Q5MNZ9 446 aaPredicted RBP8.23□□□□□ -1.09
USP47-209ENST00000530041 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
USP47-209ENST00000530041 TFE3P19532 575 aaPredicted RBP8.22□□□□□ -1.09
USP47-209ENST00000530041 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
USP47-209ENST00000530041 WNT10AQ9GZT5 417 aa8.22□□□□□ -1.09
USP47-209ENST00000530041 MIR1-1HGQ9H1L0 117 aa8.22□□□□□ -1.09
USP47-209ENST00000530041 MKNK2Q9HBH9 465 aa8.22□□□□□ -1.09
USP47-209ENST00000530041 PRDM10Q9NQV6 1147 aa8.22□□□□□ -1.09
USP47-209ENST00000530041 VTI1BQ9UEU0 232 aa8.22□□□□□ -1.09
USP47-209ENST00000530041 ZBTB7CA1YPR0 619 aa8.21□□□□□ -1.1
USP47-209ENST00000530041 CDK8P49336 464 aa8.21□□□□□ -1.1
USP47-209ENST00000530041 NFXL1Q6ZNB6 911 aa8.21□□□□□ -1.1
USP47-209ENST00000530041 FAM181AQ8N9Y4 354 aa8.21□□□□□ -1.1
USP47-209ENST00000530041 BCL2L13Q9BXK5 485 aa8.21□□□□□ -1.1
USP47-209ENST00000530041 GFRA2O00451 464 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 LRIG2O94898 1065 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 IRAK1P51617 712 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 ARMCX6Q7L4S7 300 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 PLD6Q8N2A8 252 aaKnown RBP8.2□□□□□ -1.1
USP47-209ENST00000530041 NETO1Q8TDF5 533 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 FBRSQ9HAH7 460 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 TLR6Q9Y2C9 796 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 TACC3Q9Y6A5 838 aa8.2□□□□□ -1.1
USP47-209ENST00000530041 OXCT1P55809 520 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 ETF1P62495 437 aaKnown RBP8.19□□□□□ -1.1
USP47-209ENST00000530041 SLBPQ14493 270 aaKnown RBP eCLIP8.19□□□□□ -1.1
USP47-209ENST00000530041 TSNAXIP1Q2TAA8 658 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 FAM214BQ7L5A3 538 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 BCL7CQ8WUZ0 217 aaPredicted RBP8.19□□□□□ -1.1
USP47-209ENST00000530041 MISP3Q96FF7 219 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 HEXIM2Q96MH2 286 aaKnown RBP8.19□□□□□ -1.1
USP47-209ENST00000530041 GTF2IRD1Q9UHL9 959 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 U3KQE9 123 aa8.19□□□□□ -1.1
USP47-209ENST00000530041 COL17A1Q9UMD9 1497 aaPredicted RBP8.19□□□□□ -1.1
USP47-209ENST00000530041 CAP2P40123 477 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 ZNF326Q5BKZ1 582 aaKnown RBP8.18□□□□□ -1.1
USP47-209ENST00000530041 MCTP1Q6DN14 999 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 HID1Q8IV36 788 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 TP53INP2Q8IXH6 220 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 FLCNQ8NFG4 579 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 GIPC2Q8TF65 315 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 SLC5A6Q9Y289 635 aa8.18□□□□□ -1.1
USP47-209ENST00000530041 IGF2BP3O00425 579 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP47-209ENST00000530041 CEACAM5P06731 702 aa8.17□□□□□ -1.1
USP47-209ENST00000530041 GRK4P32298 578 aa8.17□□□□□ -1.1
USP47-209ENST00000530041 RPL6Q02878 288 aaKnown RBP8.17□□□□□ -1.1
USP47-209ENST00000530041 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
USP47-209ENST00000530041 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
USP47-209ENST00000530041 DIEXFQ68CQ4 756 aaKnown RBP8.17□□□□□ -1.1
USP47-209ENST00000530041 CCDC84Q86UT8 332 aaPredicted RBP8.17□□□□□ -1.1
USP47-209ENST00000530041 ABI1Q8IZP0 508 aa8.17□□□□□ -1.1
USP47-209ENST00000530041 AGBL5Q8NDL9 886 aa8.17□□□□□ -1.1
USP47-209ENST00000530041 JARID2Q92833 1246 aaPredicted RBP8.17□□□□□ -1.1
USP47-209ENST00000530041 RSRP1Q9BUV0 290 aa8.17□□□□□ -1.1
USP47-209ENST00000530041 PAK6Q9NQU5 681 aaPredicted RBP8.17□□□□□ -1.1
USP47-209ENST00000530041 EOMESO95936 686 aa8.16□□□□□ -1.1
USP47-209ENST00000530041 NKG7Q16617 165 aa8.16□□□□□ -1.1
USP47-209ENST00000530041 HOMEZQ8IX15 550 aa8.16□□□□□ -1.1
USP47-209ENST00000530041 MFSD2AQ8NA29 543 aa8.16□□□□□ -1.1
USP47-209ENST00000530041 ADGRE2Q9UHX3 823 aa8.16□□□□□ -1.1
USP47-209ENST00000530041 VAV3Q9UKW4 847 aa8.16□□□□□ -1.1
USP47-209ENST00000530041 PLAGL2Q9UPG8 496 aa8.16□□□□□ -1.1
USP47-209ENST00000530041 SLITRK5O94991 958 aa8.15□□□□□ -1.1
USP47-209ENST00000530041 LMNB2Q03252 620 aa8.15□□□□□ -1.1
USP47-209ENST00000530041 PRKCQQ04759 706 aa8.15□□□□□ -1.1
USP47-209ENST00000530041 CAMK2GQ13555 558 aaPredicted RBP8.15□□□□□ -1.1
USP47-209ENST00000530041 PWP1Q13610 501 aa8.15□□□□□ -1.1
USP47-209ENST00000530041 RELL1Q8IUW5 271 aa8.15□□□□□ -1.1
USP47-209ENST00000530041 TNKS2Q9H2K2 1166 aa8.15□□□□□ -1.1
USP47-209ENST00000530041 TMEM265A0A087WTH1 108 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 F6X3S4 739 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 PF4P02776 101 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 ITIH2P19823 946 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 BNIP3Q12983 259 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 SPRED2Q7Z698 418 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 WFDC3Q8IUB2 231 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 HRASLS5Q96KN8 279 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 RHOVQ96L33 236 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 TMEM74Q96NL1 305 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 PRDM5Q9NQX1 630 aaPredicted RBP8.14□□□□□ -1.11
USP47-209ENST00000530041 MAPK8IP1Q9UQF2 711 aa8.14□□□□□ -1.11
USP47-209ENST00000530041 CILPO75339 1184 aa8.13□□□□□ -1.11
USP47-209ENST00000530041 CST3P01034 146 aaPredicted RBP8.13□□□□□ -1.11
USP47-209ENST00000530041 PGRP06401 933 aa8.13□□□□□ -1.11
USP47-209ENST00000530041 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
USP47-209ENST00000530041 GBP2P32456 591 aaPredicted RBP8.13□□□□□ -1.11
USP47-209ENST00000530041 PDE4BQ07343 736 aa8.13□□□□□ -1.11
USP47-209ENST00000530041 MRPL58Q14197 206 aaKnown RBP8.13□□□□□ -1.11
USP47-209ENST00000530041 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
USP47-209ENST00000530041 BNC2Q6ZN30 1099 aaPredicted RBP8.13□□□□□ -1.11
USP47-209ENST00000530041 ZNF574Q6ZN55 896 aaPredicted RBP8.13□□□□□ -1.11
USP47-209ENST00000530041 GATAD2BQ8WXI9 593 aa8.13□□□□□ -1.11
USP47-209ENST00000530041 MIPEPQ99797 713 aa8.13□□□□□ -1.11
USP47-209ENST00000530041 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
USP47-209ENST00000530041 TJP2Q9UDY2 1190 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms