RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 GCKRQ14397 625 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 CMTR1Q8N1G2 835 aaKnown RBP9.09□□□□□ -0.95
CTNND1-220ENST00000529526 MSANTD4Q8NCY6 345 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 TGFBRAP1Q8WUH2 860 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 KAT6BQ8WYB5 2073 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 HPDP32754 393 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-220ENST00000529526 CALCOCO2Q13137 446 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 CFAP58Q5T655 872 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 HDXQ7Z353 690 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 NAPGQ99747 312 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-220ENST00000529526 CCDC94Q9BW85 323 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-220ENST00000529526 GTPBP4Q9BZE4 634 aaKnown RBP9.09□□□□□ -0.95
CTNND1-220ENST00000529526 TXNDC16Q9P2K2 825 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 MTUS1Q9ULD2 1270 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 LMTK3Q96Q04 1460 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 CUTAO60888 179 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 ZNF75DP51815 510 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 NLRP12P59046 1061 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 KBTBD3Q8NAB2 608 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 FAM76AQ8TAV0 307 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 TTC14Q96N46 770 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 SEC62Q99442 399 aaKnown RBP9.09□□□□□ -0.95
CTNND1-220ENST00000529526 PZPP20742 1482 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 HS1BP3Q53T59 392 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 NELFCDQ8IXH7 590 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 TRMT44Q8IYL2 757 aaKnown RBP9.09□□□□□ -0.95
CTNND1-220ENST00000529526 RAB3IL1Q8TBN0 382 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 PICK1Q9NRD5 415 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 FAM169AQ9Y6X4 670 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 ARHGEF12Q9NZN5 1544 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 AOX1Q06278 1338 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 ADCY7P51828 1080 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 RASA3Q14644 834 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 KRT40Q6A162 431 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 PPP1R21Q6ZMI0 780 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 SNX29Q8TEQ0 813 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 PSMB7Q99436 277 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 VPS54Q9P1Q0 977 aa9.09□□□□□ -0.95
CTNND1-220ENST00000529526 PNOCQ13519 176 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 FAM98CQ17RN3 349 aaKnown RBP9.08□□□□□ -0.96
CTNND1-220ENST00000529526 DNAJC10Q8IXB1 793 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 LPIN2Q92539 896 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 KIFAP3Q92845 792 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 SMC6Q96SB8 1091 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 SH2D4AQ9H788 454 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 E7EWF7 191 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 ATP2A2P16615 1042 aaKnown RBP9.08□□□□□ -0.96
CTNND1-220ENST00000529526 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-220ENST00000529526 CEP57Q86XR8 500 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 TRIM31Q9BZY9 425 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 ZNF408Q9H9D4 720 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 SMTNP53814 917 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 HAUS3Q68CZ6 603 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 NELFBQ8WX92 580 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 TMOD4Q9NZQ9 345 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 CCDC160A6NGH7 325 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 POSTNQ15063 836 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 RABEP2Q9H5N1 569 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 ARHGEF35A5YM69 484 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 EBAG9O00559 213 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
CTNND1-220ENST00000529526 KCNQ3O43525 872 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 CCDC26Q8TAB7 109 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 GINS2Q9Y248 185 aa9.08□□□□□ -0.96
CTNND1-220ENST00000529526 IRX5P78411 483 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 MTX1Q13505 466 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 CALCRLQ16602 461 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 DPP8Q6V1X1 898 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 CPXCR1Q8N123 301 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 CARD6Q9BX69 1037 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 ZMYND15Q9H091 742 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 SAMD15Q9P1V8 674 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 BIN2Q9UBW5 565 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 LRWD1Q9UFC0 647 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 STRN3Q13033 797 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 TRIM14Q14142 442 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 TAF12Q16514 161 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 ME3Q16798 604 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 C8orf74Q6P047 294 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 MYCT1Q8N699 235 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 PLEKHA4Q9H4M7 779 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 STX10O60499 249 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 EIF4A1P60842 406 aaKnown RBP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 NONOQ15233 471 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 CABP7Q86V35 215 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 DNMT1P26358 1616 aaKnown RBP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 SHANK2Q9UPX8 1470 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 GCNT3O95395 438 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 SLC1A4P43007 532 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 GTF2A1P52655 376 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 CFAP157Q5JU67 520 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 KIFC2Q96AC6 838 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 ZNF496Q96IT1 587 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-220ENST00000529526 USTQ9Y2C2 406 aa9.07□□□□□ -0.96
CTNND1-220ENST00000529526 VIMP08670 466 aaKnown RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 TRPC3Q13507 836 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms