RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RNGTTO60942 597 aaKnown RBP7.73□□□□□ -1.17
CTR9-204ENST00000529355 RXRBP28702 533 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 ERVK-24P63145 666 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 PWP1Q13610 501 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 PRR23CQ6ZRP0 262 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 FAM196AQ6ZSG2 479 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 BEND4Q6ZU67 534 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 ISL2Q96A47 359 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 ELMO3Q96BJ8 720 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 SPON2Q9BUD6 331 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 SEMA6CQ9H3T2 930 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 FBRSQ9HAH7 460 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 SYNGAP1Q96PV0 1343 aa7.73□□□□□ -1.17
CTR9-204ENST00000529355 ERCC5P28715 1186 aaPredicted RBP7.72□□□□□ -1.17
CTR9-204ENST00000529355 C7orf69Q9H7B7 122 aa7.72□□□□□ -1.17
CTR9-204ENST00000529355 DAGLAQ9Y4D2 1042 aa7.72□□□□□ -1.17
CTR9-204ENST00000529355 DHX15O43143 795 aaKnown RBP7.71□□□□□ -1.18
CTR9-204ENST00000529355 RPL6Q02878 288 aaKnown RBP7.71□□□□□ -1.18
CTR9-204ENST00000529355 PAK2Q13177 524 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 NFKBIBQ15653 356 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 ZBTB37Q5TC79 503 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 HDXQ7Z353 690 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 RNF214Q8ND24 703 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 ATXN3LQ9H3M9 355 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 BRMS1Q9HCU9 246 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 RAXQ9Y2V3 346 aa7.71□□□□□ -1.18
CTR9-204ENST00000529355 SUPT16HQ9Y5B9 1047 aaKnown RBP7.71□□□□□ -1.18
CTR9-204ENST00000529355 GRK4P32298 578 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 ADMP35318 185 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 NKG7Q16617 165 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 UVSSAQ2YD98 709 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 SEZ6Q53EL9 994 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 SCARA3Q6AZY7 606 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 SEZ6L2Q6UXD5 910 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 CCDC84Q86UT8 332 aaPredicted RBP7.7□□□□□ -1.18
CTR9-204ENST00000529355 KIAA0825Q8IV33 1275 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 SMYD4Q8IYR2 804 aaPredicted RBP7.7□□□□□ -1.18
CTR9-204ENST00000529355 ZNF654Q8IZM8 581 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 EZH1Q92800 747 aaPredicted RBP7.7□□□□□ -1.18
CTR9-204ENST00000529355 SNCAIPQ9Y6H5 919 aa7.7□□□□□ -1.18
CTR9-204ENST00000529355 FAM95CA0A1B0GW59 222 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 DYRK3O43781 588 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 REC114Q7Z4M0 266 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 CLEC10AQ8IUN9 316 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 FAM83CQ9BQN1 747 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 PIDD1Q9HB75 910 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 C1GALT1Q9NS00 363 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 STOML1Q9UBI4 398 aa7.69□□□□□ -1.18
CTR9-204ENST00000529355 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.68□□□□□ -1.18
CTR9-204ENST00000529355 UPK3BL1B0FP48 263 aa7.68□□□□□ -1.18
CTR9-204ENST00000529355 UPK3BL2E5RIL1 263 aa7.68□□□□□ -1.18
CTR9-204ENST00000529355 DNAJA2O60884 412 aa7.68□□□□□ -1.18
CTR9-204ENST00000529355 YBX3P16989 372 aaKnown RBP eCLIP7.68□□□□□ -1.182e-15■■■■□ 19.4
CTR9-204ENST00000529355 CLCQ05315 142 aa7.68□□□□□ -1.18
CTR9-204ENST00000529355 CDK5R2Q13319 367 aa7.68□□□□□ -1.18
CTR9-204ENST00000529355 NT5C1AQ9BXI3 368 aa7.68□□□□□ -1.18
CTR9-204ENST00000529355 TGIF2Q9GZN2 237 aa7.68□□□□□ -1.18
CTR9-204ENST00000529355 FANCGO15287 622 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 ETF1P62495 437 aaKnown RBP7.67□□□□□ -1.18
CTR9-204ENST00000529355 APOBRQ0VD83 1088 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 MPP2Q14168 576 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 SLBPQ14493 270 aaKnown RBP eCLIP7.67□□□□□ -1.18
CTR9-204ENST00000529355 GATA6Q92908 595 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 MFSD14AQ96MC6 490 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 DPH2Q9BQC3 489 aaPredicted RBP7.67□□□□□ -1.18
CTR9-204ENST00000529355 ANTXR1Q9H6X2 564 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 SSU72Q9NP77 194 aaKnown RBP7.67□□□□□ -1.18
CTR9-204ENST00000529355 TJP2Q9UDY2 1190 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 PRKAG2Q9UGJ0 569 aa7.67□□□□□ -1.18
CTR9-204ENST00000529355 LEFTY1O75610 366 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 BPNT1O95861 308 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 PGRP06401 933 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 H2AFB1P0C5Y9 115 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 H2AFB2P0C5Z0 115 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 GK5Q6ZS86 529 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.66□□□□□ -1.18
CTR9-204ENST00000529355 FBXL6Q8N531 539 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 NKD1Q969G9 470 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 ACSF2Q96CM8 615 aaPredicted RBP7.66□□□□□ -1.18
CTR9-204ENST00000529355 PCDHB14Q9Y5E9 798 aa7.66□□□□□ -1.18
CTR9-204ENST00000529355 FAM170BA6NMN3 283 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 MCM4P33991 863 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 SLITRK4Q8IW52 837 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 XAGE3Q8WTP9 111 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 LRRC3Q9BY71 257 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 CCSER2Q9H7U1 834 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 GINM1Q9NU53 330 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 PCOLCE2Q9UKZ9 415 aa7.65□□□□□ -1.18
CTR9-204ENST00000529355 CNTNAP4Q9C0A0 1308 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 CHURC1-FNTBB4DL54 471 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 HTR3BO95264 441 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 F13BP05160 661 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 PLCG1P19174 1290 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 FSTP19883 344 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 PRSS36Q5K4E3 855 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 PAOXQ6QHF9 649 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 RIN3Q8TB24 985 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 ZNF507Q8TCN5 953 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms