RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 MAGEB6P1A0A0J9YX57 407 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 IREB2P48200 963 aaKnown RBP13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 MAP3K9P80192 1104 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 NUCB1Q02818 461 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 ANKRD13AQ8IZ07 590 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 OSBP2Q969R2 916 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 SLC10A4Q96EP9 437 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 PTPN18Q99952 460 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 RNF186Q9NXI6 227 aa13.84□□□□□ -0.19
CCDC90B-211ENST00000529073 COL2A1P02458 1487 aaPredicted RBP13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 TRPA1O75762 1119 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 MAP2K2P36507 400 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 PDE1AP54750 535 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 CAP1Q01518 475 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 CCDC129Q6ZRS4 1044 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 SLC44A5Q8NCS7 719 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 CCDC102AQ96A19 550 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 GCC1Q96CN9 775 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.2
CCDC90B-211ENST00000529073 GDF11O95390 407 aa13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 PLCD1P51178 756 aa13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 TTF1Q15361 905 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 MS4A4AQ96JQ5 239 aa13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-211ENST00000529073 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 IRF6O14896 467 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 FOXP2O15409 715 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 BAG3O95817 575 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 USP5P45974 858 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 STAP2Q9UGK3 403 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 PTPRFP10586 1907 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
CCDC90B-211ENST00000529073 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 MOGSQ13724 837 aa13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 DCAF15Q66K64 600 aa13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 CLEC10AQ8IUN9 316 aa13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 CASP8AP2Q9UKL3 1982 aa13.8□□□□□ -0.2
CCDC90B-211ENST00000529073 GLRX3O76003 335 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 ECM2O94769 699 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 GSPT1P15170 499 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 MAP2K1Q02750 393 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 GPATCH3Q96I76 525 aa13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 FSD1Q9BTV5 496 aa13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 DCP1AQ9NPI6 582 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 CSADQ9Y600 493 aa13.79□□□□□ -0.2
CCDC90B-211ENST00000529073 CCL15-CCL14A0A0B4J2E2 113 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 UBE3CQ15386 1083 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 CCL15Q16663 113 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 NOL9Q5SY16 702 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 VPS53Q5VIR6 699 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 IFNL1Q8IU54 200 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 IL25Q9H293 177 aa13.78□□□□□ -0.2
CCDC90B-211ENST00000529073 PTPRAP18433 802 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 SHMT1P34896 483 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 TM4SF4P48230 202 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 CTCFP49711 727 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 PPIL2Q13356 520 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 ERO1BQ86YB8 467 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 APPBP2Q92624 585 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 STRBPQ96SI9 672 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 CRNKL1Q9BZJ0 848 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 TACC3Q9Y6A5 838 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 SLC4A4Q9Y6R1 1079 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 ZHX2Q9Y6X8 837 aa13.77□□□□□ -0.21
CCDC90B-211ENST00000529073 LOC285556D6RIA3 1793 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 GSG1L2A8MUP6 293 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 GPAA1O43292 621 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 PEX10O60683 326 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 PLCG2P16885 1265 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 AAMPQ13685 434 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 ZMYM1Q5SVZ6 1142 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
CCDC90B-211ENST00000529073 TESPA1A2RU30 521 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-211ENST00000529073 TRIM75PA6NK02 468 aa13.75□□□□□ -0.21
CCDC90B-211ENST00000529073 USP17L12C9JPN9 530 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms