RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PNMA3Q9UL41 463 aa23.66■■□□□ 1.38
SSRP1-204ENST00000529002 OGDHLQ9ULD0 1010 aa23.66■■□□□ 1.38
SSRP1-204ENST00000529002 DZIP1Q86YF9 867 aaKnown RBP23.65■■□□□ 1.38
SSRP1-204ENST00000529002 ASCC2Q9H1I8 757 aaPredicted RBP23.65■■□□□ 1.38
SSRP1-204ENST00000529002 CEP126Q9P2H0 1117 aa23.65■■□□□ 1.38
SSRP1-204ENST00000529002 MDM2Q00987 491 aaPredicted RBP23.64■■□□□ 1.37
SSRP1-204ENST00000529002 PROCA1Q8NCQ7 364 aaPredicted RBP23.64■■□□□ 1.37
SSRP1-204ENST00000529002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.64■■□□□ 1.37
SSRP1-204ENST00000529002 PA2G4Q9UQ80 394 aaKnown RBP23.64■■□□□ 1.37
SSRP1-204ENST00000529002 PRKAR2AP13861 404 aaKnown RBP23.63■■□□□ 1.37
SSRP1-204ENST00000529002 GCLCP48506 637 aaPredicted RBP23.63■■□□□ 1.37
SSRP1-204ENST00000529002 RASGRF1Q13972 1273 aa23.63■■□□□ 1.37
SSRP1-204ENST00000529002 CCDC102BQ68D86 513 aa23.63■■□□□ 1.37
SSRP1-204ENST00000529002 ZNF384Q8TF68 577 aa23.63■■□□□ 1.37
SSRP1-204ENST00000529002 FRMPD3Q5JV73 1810 aa23.62■■□□□ 1.37
SSRP1-204ENST00000529002 RHBDL3P58872 404 aa23.62■■□□□ 1.37
SSRP1-204ENST00000529002 ZNF280CQ8ND82 737 aa23.62■■□□□ 1.37
SSRP1-204ENST00000529002 FAM161BQ96MY7 647 aa23.62■■□□□ 1.37
SSRP1-204ENST00000529002 SEMA3EO15041 775 aa23.61■■□□□ 1.37
SSRP1-204ENST00000529002 LRRC26Q2I0M4 334 aa23.61■■□□□ 1.37
SSRP1-204ENST00000529002 MAP3K21Q5TCX8 1036 aa23.61■■□□□ 1.37
SSRP1-204ENST00000529002 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.61■■□□□ 1.37
SSRP1-204ENST00000529002 GUCD1Q96NT3 240 aa23.61■■□□□ 1.37
SSRP1-204ENST00000529002 SIPA1L1O43166 1804 aa23.61■■□□□ 1.37
SSRP1-204ENST00000529002 MROH7-TTC4A0A0A0MT08 1334 aa23.6■■□□□ 1.37
SSRP1-204ENST00000529002 TBC1D12O60347 775 aa23.6■■□□□ 1.37
SSRP1-204ENST00000529002 SSH1Q8WYL5 1049 aa23.6■■□□□ 1.37
SSRP1-204ENST00000529002 TXNRD2Q9NNW7 524 aa23.6■■□□□ 1.37
SSRP1-204ENST00000529002 PTPRCP08575 1304 aa23.59■■□□□ 1.37
SSRP1-204ENST00000529002 CIAO1O76071 339 aa23.59■■□□□ 1.37
SSRP1-204ENST00000529002 COL6A1P12109 1028 aa23.59■■□□□ 1.37
SSRP1-204ENST00000529002 CCND3P30281 292 aaPredicted RBP23.59■■□□□ 1.37
SSRP1-204ENST00000529002 TIMM10P62072 90 aa23.59■■□□□ 1.37
SSRP1-204ENST00000529002 MECOMQ03112 1051 aa23.59■■□□□ 1.37
SSRP1-204ENST00000529002 ZGPATQ8N5A5 531 aaKnown RBP23.59■■□□□ 1.37
SSRP1-204ENST00000529002 FAM163AQ96GL9 167 aaPredicted RBP23.59■■□□□ 1.37
SSRP1-204ENST00000529002 OSBPL5Q9H0X9 879 aaPredicted RBP23.59■■□□□ 1.37
SSRP1-204ENST00000529002 GPR75-ASB3A0A0A6YYF3 556 aa23.58■■□□□ 1.37
SSRP1-204ENST00000529002 CACNB2Q08289 660 aaPredicted RBP23.58■■□□□ 1.37
SSRP1-204ENST00000529002 CCL14Q16627 93 aa23.58■■□□□ 1.37
SSRP1-204ENST00000529002 P2RX7Q99572 595 aaKnown RBP23.58■■□□□ 1.37
SSRP1-204ENST00000529002 MORF4L1Q9UBU8 362 aa23.58■■□□□ 1.37
SSRP1-204ENST00000529002 CAP2P40123 477 aa23.57■■□□□ 1.36
SSRP1-204ENST00000529002 USP17L5A8MUK1 530 aa23.56■■□□□ 1.36
SSRP1-204ENST00000529002 JAG1P78504 1218 aa23.56■■□□□ 1.36
SSRP1-204ENST00000529002 PABPC4Q13310 644 aaKnown RBP eCLIP23.56■■□□□ 1.36
SSRP1-204ENST00000529002 SHROOM1Q2M3G4 852 aaPredicted RBP23.56■■□□□ 1.36
SSRP1-204ENST00000529002 SH3D19Q5HYK7 790 aa23.56■■□□□ 1.36
SSRP1-204ENST00000529002 SLF2Q8IX21 1173 aa23.56■■□□□ 1.36
SSRP1-204ENST00000529002 CDK5RAP2Q96SN8 1893 aa23.56■■□□□ 1.36
SSRP1-204ENST00000529002 POTEB2H3BUK9 544 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 IL15P40933 162 aaPredicted RBP23.55■■□□□ 1.36
SSRP1-204ENST00000529002 MTMR2Q13614 643 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 Q3C1V9 767 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 LHX8Q68G74 356 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 PI16Q6UXB8 463 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 TBC1D9Q6ZT07 1266 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 NUDT12Q9BQG2 462 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 FBXO3Q9UK99 471 aa23.55■■□□□ 1.36
SSRP1-204ENST00000529002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.55■■□□□ 1.36
SSRP1-204ENST00000529002 IRX3P78415 501 aaPredicted RBP23.54■■□□□ 1.36
SSRP1-204ENST00000529002 FAM9BQ8IZU0 186 aa23.54■■□□□ 1.36
SSRP1-204ENST00000529002 PORCNQ9H237 461 aa23.54■■□□□ 1.36
SSRP1-204ENST00000529002 MAST2Q6P0Q8 1798 aa23.54■■□□□ 1.36
SSRP1-204ENST00000529002 UBTFL1P0CB47 393 aaPredicted RBP23.53■■□□□ 1.36
SSRP1-204ENST00000529002 ZKSCAN1P17029 563 aaPredicted RBP23.53■■□□□ 1.36
SSRP1-204ENST00000529002 SPTY2D1Q68D10 685 aaPredicted RBP23.53■■□□□ 1.36
SSRP1-204ENST00000529002 POTEEQ6S8J3 1075 aa23.53■■□□□ 1.36
SSRP1-204ENST00000529002 XAGE2Q96GT9 111 aa23.53■■□□□ 1.36
SSRP1-204ENST00000529002 RBPJLQ9UBG7 517 aa23.53■■□□□ 1.36
SSRP1-204ENST00000529002 COL2A1P02458 1487 aaPredicted RBP23.53■■□□□ 1.36
SSRP1-204ENST00000529002 HERVK_113P62684 666 aa23.52■■□□□ 1.36
SSRP1-204ENST00000529002 GPRC5AQ8NFJ5 357 aa23.52■■□□□ 1.36
SSRP1-204ENST00000529002 USP6NLQ92738 828 aa23.52■■□□□ 1.36
SSRP1-204ENST00000529002 A0A1B0GUL7 405 aa23.51■■□□□ 1.35
SSRP1-204ENST00000529002 NPM3O75607 178 aaKnown RBP23.51■■□□□ 1.35
SSRP1-204ENST00000529002 XRCC5P13010 732 aaKnown RBP23.51■■□□□ 1.35
SSRP1-204ENST00000529002 NSUN4Q96CB9 384 aaKnown RBP23.51■■□□□ 1.35
SSRP1-204ENST00000529002 AS3MTQ9HBK9 375 aa23.51■■□□□ 1.35
SSRP1-204ENST00000529002 LAMA2P24043 3122 aaKnown RBP23.51■■□□□ 1.35
SSRP1-204ENST00000529002 PDS5AQ29RF7 1337 aaKnown RBP23.51■■□□□ 1.35
SSRP1-204ENST00000529002 ZNF521Q96K83 1311 aa23.51■■□□□ 1.35
SSRP1-204ENST00000529002 MYO5AQ9Y4I1 1855 aaKnown RBP23.51■■□□□ 1.35
SSRP1-204ENST00000529002 VCANP13611 3396 aa23.51■■□□□ 1.35
SSRP1-204ENST00000529002 LTBP2Q14767 1821 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 ZBTB22O15209 634 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 BACE1P56817 501 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 SOCS4Q8WXH5 440 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 PAGR1Q9BTK6 254 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 TBC1D2Q9BYX2 928 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 HMG20BQ9P0W2 317 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 NDUFB9Q9Y6M9 179 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 EYSQ5T1H1 3165 aa23.5■■□□□ 1.35
SSRP1-204ENST00000529002 HOXA7P31268 230 aaPredicted RBP23.49■■□□□ 1.35
SSRP1-204ENST00000529002 TFCP2Q12800 502 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 PDE3AQ14432 1141 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 MORN1Q5T089 497 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 FAM109BQ6ICB4 259 aaPredicted RBP23.49■■□□□ 1.35
SSRP1-204ENST00000529002 GPR142Q7Z601 462 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms