RNA–Protein interactions for RNA: ENST00000528543.1

BBS1-214, Transcript of Bardet-Biedl syndrome 1, humanhuman

TSL 5

Gene BBS1, Length 384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-214ENST00000528543 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 MAPK4P31152 587 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
BBS1-214ENST00000528543 RGS2P41220 211 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 RTP1P59025 263 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 MRPS5P82675 430 aaKnown RBP12.76□□□□□ -0.37
BBS1-214ENST00000528543 C9orf50Q5SZB4 431 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 USP38Q8NB14 1042 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 LPAR1Q92633 364 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 APBA2Q99767 749 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
BBS1-214ENST00000528543 CCND3P30281 292 aaPredicted RBP12.75□□□□□ -0.37
BBS1-214ENST00000528543 TSPYL6Q8N831 410 aa12.75□□□□□ -0.37
BBS1-214ENST00000528543 GTF3C2Q8WUA4 911 aaPredicted RBP12.75□□□□□ -0.37
BBS1-214ENST00000528543 GAS2L1Q99501 681 aaPredicted RBP12.75□□□□□ -0.37
BBS1-214ENST00000528543 ASCC2Q9H1I8 757 aaPredicted RBP12.75□□□□□ -0.37
BBS1-214ENST00000528543 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
BBS1-214ENST00000528543 GRM8O00222 908 aa12.74□□□□□ -0.37
BBS1-214ENST00000528543 G2E3Q7L622 706 aa12.74□□□□□ -0.37
BBS1-214ENST00000528543 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
BBS1-214ENST00000528543 ZNF280CQ8ND82 737 aa12.74□□□□□ -0.37
BBS1-214ENST00000528543 GPRC5AQ8NFJ5 357 aa12.74□□□□□ -0.37
BBS1-214ENST00000528543 RNPC3Q96LT9 517 aaKnown RBP12.74□□□□□ -0.37
BBS1-214ENST00000528543 OSBPL5Q9H0X9 879 aaPredicted RBP12.74□□□□□ -0.37
BBS1-214ENST00000528543 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
BBS1-214ENST00000528543 DDX20Q9UHI6 824 aaKnown RBP12.74□□□□□ -0.37
BBS1-214ENST00000528543 UTYO14607 1347 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 TBC1D12O60347 775 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 PDE8BO95263 885 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
BBS1-214ENST00000528543 IRX3P78415 501 aaPredicted RBP12.73□□□□□ -0.37
BBS1-214ENST00000528543 GRIN2CQ14957 1233 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 TWISTNBQ3B726 338 aaPredicted RBP12.73□□□□□ -0.37
BBS1-214ENST00000528543 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 MFSD14CQ5VZR4 134 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 CCAR1Q8IX12 1150 aaKnown RBP12.73□□□□□ -0.37
BBS1-214ENST00000528543 USP6NLQ92738 828 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 PRDM5Q9NQX1 630 aaPredicted RBP12.73□□□□□ -0.37
BBS1-214ENST00000528543 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
BBS1-214ENST00000528543 IFIT1P09914 478 aaKnown RBP12.72□□□□□ -0.37
BBS1-214ENST00000528543 DNAJB2P25686 324 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 RGS3P49796 1198 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 SPP2Q13103 211 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 SNX17Q15036 470 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 ARRDC4Q8NCT1 418 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 BADQ92934 168 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 TSR2Q969E8 191 aaKnown RBP12.72□□□□□ -0.37
BBS1-214ENST00000528543 ZNF576Q9H609 170 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 MUC6Q6W4X9 2439 aa12.72□□□□□ -0.37
BBS1-214ENST00000528543 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
BBS1-214ENST00000528543 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 LDHBP07195 334 aaKnown RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 HMGCS2P54868 508 aa12.71□□□□□ -0.37
BBS1-214ENST00000528543 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
BBS1-214ENST00000528543 MORN1Q5T089 497 aa12.71□□□□□ -0.37
BBS1-214ENST00000528543 VGLL2Q8N8G2 317 aa12.71□□□□□ -0.37
BBS1-214ENST00000528543 PUS3Q9BZE2 481 aaKnown RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
BBS1-214ENST00000528543 PLXNA1Q9UIW2 1896 aa12.71□□□□□ -0.37
BBS1-214ENST00000528543 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 GPR142Q7Z601 462 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 PLEKHH3Q7Z736 793 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 ZFPM1Q8IX07 1006 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 SLF2Q8IX21 1173 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 TIFAQ96CG3 184 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 PDLIM7Q9NR12 457 aa12.7□□□□□ -0.38
BBS1-214ENST00000528543 C9orf78Q9NZ63 289 aaPredicted RBP12.7□□□□□ -0.38
BBS1-214ENST00000528543 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
BBS1-214ENST00000528543 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
BBS1-214ENST00000528543 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
BBS1-214ENST00000528543 HERVK_113P62684 666 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 MAP2K5Q13163 448 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 CCL14Q16627 93 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 ZGPATQ8N5A5 531 aaKnown RBP12.69□□□□□ -0.38
BBS1-214ENST00000528543 SNX27Q96L92 541 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
BBS1-214ENST00000528543 MRS2Q9HD23 443 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
BBS1-214ENST00000528543 GAKO14976 1311 aa12.68□□□□□ -0.38
BBS1-214ENST00000528543 USP17L5A8MUK1 530 aa12.68□□□□□ -0.38
BBS1-214ENST00000528543 SLC5A1P13866 664 aa12.68□□□□□ -0.38
BBS1-214ENST00000528543 PRDX5P30044 214 aa12.68□□□□□ -0.38
BBS1-214ENST00000528543 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
BBS1-214ENST00000528543 ERVK-24P63145 666 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms