RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 HOXD10P28358 340 aa28.17■■■□□ 2.1
PKP3-206ENST00000528036 MOGSQ13724 837 aa28.17■■■□□ 2.1
PKP3-206ENST00000528036 ARMC5Q96C12 935 aa28.17■■■□□ 2.1
PKP3-206ENST00000528036 TGFBRAP1Q8WUH2 860 aa28.16■■■□□ 2.1
PKP3-206ENST00000528036 TRIM34Q9BYJ4 488 aa28.16■■■□□ 2.1
PKP3-206ENST00000528036 IL1RAPL2Q9NP60 686 aa28.16■■■□□ 2.1
PKP3-206ENST00000528036 HLA-DOAP06340 250 aa28.15■■■□□ 2.1
PKP3-206ENST00000528036 CAP2P40123 477 aa28.15■■■□□ 2.1
PKP3-206ENST00000528036 METTL16Q86W50 562 aaKnown RBP28.15■■■□□ 2.1
PKP3-206ENST00000528036 AS3MTQ9HBK9 375 aa28.15■■■□□ 2.1
PKP3-206ENST00000528036 FLT1P17948 1338 aa28.15■■■□□ 2.1
PKP3-206ENST00000528036 MAST2Q6P0Q8 1798 aa28.14■■■□□ 2.1
PKP3-206ENST00000528036 GPAT2Q6NUI2 795 aa28.14■■■□□ 2.1
PKP3-206ENST00000528036 SIRT2Q8IXJ6 389 aa28.14■■■□□ 2.1
PKP3-206ENST00000528036 USP17L5A8MUK1 530 aa28.13■■■□□ 2.09
PKP3-206ENST00000528036 ADGRA1Q86SQ6 560 aa28.13■■■□□ 2.09
PKP3-206ENST00000528036 MAPKAPK5Q8IW41 473 aa28.13■■■□□ 2.09
PKP3-206ENST00000528036 CRACR2BQ8N4Y2 399 aaPredicted RBP28.13■■■□□ 2.09
PKP3-206ENST00000528036 MAGEB6Q8N7X4 407 aa28.13■■■□□ 2.09
PKP3-206ENST00000528036 PROCA1Q8NCQ7 364 aaPredicted RBP28.13■■■□□ 2.09
PKP3-206ENST00000528036 ZNF280CQ8ND82 737 aa28.13■■■□□ 2.09
PKP3-206ENST00000528036 PNMA3Q9UL41 463 aa28.13■■■□□ 2.09
PKP3-206ENST00000528036 ASNSP08243 561 aa28.12■■■□□ 2.09
PKP3-206ENST00000528036 PABPC4Q13310 644 aaKnown RBP eCLIP28.12■■■□□ 2.09
PKP3-206ENST00000528036 GADL1Q6ZQY3 521 aa28.12■■■□□ 2.09
PKP3-206ENST00000528036 ADGRA2Q96PE1 1338 aa28.12■■■□□ 2.09
PKP3-206ENST00000528036 TRIM75PA6NK02 468 aa28.11■■■□□ 2.09
PKP3-206ENST00000528036 CPA4Q9UI42 421 aa28.11■■■□□ 2.09
PKP3-206ENST00000528036 AGTPBP1Q9UPW5 1226 aa28.11■■■□□ 2.09
PKP3-206ENST00000528036 USP5P45974 858 aa28.1■■■□□ 2.09
PKP3-206ENST00000528036 SLC9C1Q4G0N8 1177 aa28.1■■■□□ 2.09
PKP3-206ENST00000528036 APBB1O00213 710 aa28.09■■■□□ 2.09
PKP3-206ENST00000528036 PSMC4P43686 418 aa28.09■■■□□ 2.09
PKP3-206ENST00000528036 WDR18Q9BV38 432 aa28.09■■■□□ 2.09
PKP3-206ENST00000528036 BCRP11274 1271 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 SPP2Q13103 211 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 TTC6Q86TZ1 520 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 TMEM106CQ9BVX2 250 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 ANTXR1Q9H6X2 564 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 PALD1Q9ULE6 856 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 PTCH2Q9Y6C5 1203 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 DOCK1Q14185 1865 aa28.08■■■□□ 2.09
PKP3-206ENST00000528036 FAM196BA6NMK8 535 aa28.07■■■□□ 2.08
PKP3-206ENST00000528036 FMNL1O95466 1100 aaPredicted RBP28.07■■■□□ 2.08
PKP3-206ENST00000528036 FCGRTP55899 365 aa28.07■■■□□ 2.08
PKP3-206ENST00000528036 DYNLL1P63167 89 aaKnown RBP28.07■■■□□ 2.08
PKP3-206ENST00000528036 MIGA1Q8NAN2 632 aa28.07■■■□□ 2.08
PKP3-206ENST00000528036 SMCR8Q8TEV9 937 aaPredicted RBP28.07■■■□□ 2.08
PKP3-206ENST00000528036 LRRCC1Q9C099 1032 aa28.07■■■□□ 2.08
PKP3-206ENST00000528036 SLURP2P0DP57 97 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 CYP2C8P10632 490 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 ATP5JP18859 108 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 CAP1Q01518 475 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 SH3D19Q5HYK7 790 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 SLC9C2Q5TAH2 1124 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 ZNF333Q96JL9 665 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 EHD4Q9H223 541 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 SRRDQ9UH36 339 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 TAOK2Q9UL54 1235 aa28.06■■■□□ 2.08
PKP3-206ENST00000528036 MAGEB6P1A0A0J9YX57 407 aa28.05■■■□□ 2.08
PKP3-206ENST00000528036 C19orf81C9J6K1 198 aa28.05■■■□□ 2.08
PKP3-206ENST00000528036 ARHGAP39Q9C0H5 1083 aa28.05■■■□□ 2.08
PKP3-206ENST00000528036 OSBPP22059 807 aa28.04■■■□□ 2.08
PKP3-206ENST00000528036 GCLCP48506 637 aaPredicted RBP28.04■■■□□ 2.08
PKP3-206ENST00000528036 C20orf194Q5TEA3 1177 aa28.04■■■□□ 2.08
PKP3-206ENST00000528036 DNAJC2Q99543 621 aaKnown RBP28.04■■■□□ 2.08
PKP3-206ENST00000528036 CRNKL1Q9BZJ0 848 aaKnown RBP28.04■■■□□ 2.08
PKP3-206ENST00000528036 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.04■■■□□ 2.08
PKP3-206ENST00000528036 SERPINB13Q9UIV8 391 aa28.04■■■□□ 2.08
PKP3-206ENST00000528036 NDUFB9Q9Y6M9 179 aa28.04■■■□□ 2.08
PKP3-206ENST00000528036 GOLIM4O00461 696 aa28.03■■■□□ 2.08
PKP3-206ENST00000528036 PDE6AP16499 860 aa28.03■■■□□ 2.08
PKP3-206ENST00000528036 TRIM47Q96LD4 638 aa28.03■■■□□ 2.08
PKP3-206ENST00000528036 RIOK1Q9BRS2 568 aaKnown RBP28.03■■■□□ 2.08
PKP3-206ENST00000528036 TMOD4Q9NZQ9 345 aa28.03■■■□□ 2.08
PKP3-206ENST00000528036 SAP30BPQ9UHR5 308 aaKnown RBP28.03■■■□□ 2.08
PKP3-206ENST00000528036 BACE1P56817 501 aa28.02■■■□□ 2.08
PKP3-206ENST00000528036 RAET1EQ8TD07 263 aa28.02■■■□□ 2.08
PKP3-206ENST00000528036 PAG1Q9NWQ8 432 aa28.02■■■□□ 2.08
PKP3-206ENST00000528036 HMGCS2P54868 508 aa28.01■■■□□ 2.07
PKP3-206ENST00000528036 RRP1BQ14684 758 aaKnown RBP28.01■■■□□ 2.07
PKP3-206ENST00000528036 HAUS7Q99871 368 aa28.01■■■□□ 2.07
PKP3-206ENST00000528036 DNAJC18Q9H819 358 aa28.01■■■□□ 2.07
PKP3-206ENST00000528036 USP17L10C9JJH3 530 aa28■■■□□ 2.07
PKP3-206ENST00000528036 FAM110CQ1W6H9 321 aa28■■■□□ 2.07
PKP3-206ENST00000528036 ZSCAN25Q6NSZ9 544 aa28■■■□□ 2.07
PKP3-206ENST00000528036 TATDN1Q6P1N9 297 aa28■■■□□ 2.07
PKP3-206ENST00000528036 CCDC84Q86UT8 332 aaPredicted RBP28■■■□□ 2.07
PKP3-206ENST00000528036 FRMD4AQ9P2Q2 1039 aaPredicted RBP28■■■□□ 2.07
PKP3-206ENST00000528036 ZBTB21Q9ULJ3 1066 aa28■■■□□ 2.07
PKP3-206ENST00000528036 MYPNQ86TC9 1320 aa27.99■■■□□ 2.07
PKP3-206ENST00000528036 ZNF532Q9HCE3 1301 aa27.99■■■□□ 2.07
PKP3-206ENST00000528036 GPATCH3Q96I76 525 aa27.99■■■□□ 2.07
PKP3-206ENST00000528036 BOLA2Q9H3K6 86 aa27.99■■■□□ 2.07
PKP3-206ENST00000528036 POLR3DP05423 398 aaPredicted RBP27.98■■■□□ 2.07
PKP3-206ENST00000528036 SLC4A8Q2Y0W8 1093 aa27.98■■■□□ 2.07
PKP3-206ENST00000528036 TREML2Q5T2D2 321 aa27.98■■■□□ 2.07
PKP3-206ENST00000528036 DCTPP1Q9H773 170 aa27.98■■■□□ 2.07
PKP3-206ENST00000528036 FOCADQ5VW36 1801 aa27.97■■■□□ 2.07
PKP3-206ENST00000528036 HOXA7P31268 230 aaPredicted RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms