RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 FAM163AQ96GL9 167 aaPredicted RBP16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 C11orf49Q9H6J7 331 aa16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 GJD2Q9UKL4 321 aa16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 MROH7-TTC4A0A0A0MT08 1334 aa16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 TBC1D12O60347 775 aa16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 UBTFL1P0CB47 393 aaPredicted RBP16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 PABPC4Q13310 644 aaKnown RBP eCLIP16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 LRIT3Q3SXY7 679 aa16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 DDX60LQ5H9U9 1706 aaKnown RBP16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 ZNF280CQ8ND82 737 aa16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 ASCC2Q9H1I8 757 aaPredicted RBP16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 PA2G4Q9UQ80 394 aaKnown RBP16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 STXBP5LQ9Y2K9 1186 aa16.15■□□□□ 0.18
CLNS1A-207ENST00000527133 LOC285556D6RIA3 1793 aa16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 ANP32CO43423 234 aa16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 RHBDL3P58872 404 aa16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 MECOMQ03112 1051 aa16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 TRIB2Q92519 343 aa16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 UBE2OQ9C0C9 1292 aaKnown RBP16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 OSBPL5Q9H0X9 879 aaPredicted RBP16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
CLNS1A-207ENST00000527133 VCANP13611 3396 aa16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 GPR75-ASB3A0A0A6YYF3 556 aa16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 ZBTB22O15209 634 aa16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 TIMM10P62072 90 aa16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 MTMR10Q9NXD2 777 aa16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 OGDHLQ9ULD0 1010 aa16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 PDS5AQ29RF7 1337 aaKnown RBP16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 EYSQ5T1H1 3165 aa16.13■□□□□ 0.17
CLNS1A-207ENST00000527133 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
CLNS1A-207ENST00000527133 CYP2B6P20813 491 aa16.12■□□□□ 0.17
CLNS1A-207ENST00000527133 RRP1BQ14684 758 aaKnown RBP16.12■□□□□ 0.17
CLNS1A-207ENST00000527133 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
CLNS1A-207ENST00000527133 ZNF384Q8TF68 577 aa16.12■□□□□ 0.17
CLNS1A-207ENST00000527133 TBC1D2Q9BYX2 928 aa16.12■□□□□ 0.17
CLNS1A-207ENST00000527133 PFASO15067 1338 aa16.12■□□□□ 0.17
CLNS1A-207ENST00000527133 USP17L5A8MUK1 530 aa16.11■□□□□ 0.17
CLNS1A-207ENST00000527133 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
CLNS1A-207ENST00000527133 CAP2P40123 477 aa16.11■□□□□ 0.17
CLNS1A-207ENST00000527133 MORF4L1Q9UBU8 362 aa16.11■□□□□ 0.17
CLNS1A-207ENST00000527133 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 ATAD5Q96QE3 1844 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 A0A1B0GUL7 405 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 PEX10O60683 326 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 IRX3P78415 501 aaPredicted RBP16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 MTMR2Q13614 643 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 MAP3K21Q5TCX8 1036 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 XAGE2Q96GT9 111 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 AS3MTQ9HBK9 375 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 COPRSQ9NQ92 184 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 SMC4Q9NTJ3 1288 aa16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 COL2A1P02458 1487 aaPredicted RBP16.1■□□□□ 0.17
CLNS1A-207ENST00000527133 GSTO1P78417 241 aa16.09■□□□□ 0.17
CLNS1A-207ENST00000527133 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
CLNS1A-207ENST00000527133 SOCS4Q8WXH5 440 aa16.09■□□□□ 0.17
CLNS1A-207ENST00000527133 NUDT12Q9BQG2 462 aa16.09■□□□□ 0.17
CLNS1A-207ENST00000527133 E9PSI1 815 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 LDHCP07864 332 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 TFCP2Q12800 502 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 ALDH1L2Q3SY69 923 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 PI16Q6UXB8 463 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 TEX11Q8IYF3 940 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 GPRC5AQ8NFJ5 357 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 NSUN4Q96CB9 384 aaKnown RBP16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 P2RX7Q99572 595 aaKnown RBP16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 TMOD4Q9NZQ9 345 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
CLNS1A-207ENST00000527133 MAP4K4O95819 1239 aaPredicted RBP16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 COL6A1P12109 1028 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 XRCC5P13010 732 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 HERVK_113P62684 666 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 CACNB2Q08289 660 aaPredicted RBP16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 LRRC26Q2I0M4 334 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 NEUROD6Q96NK8 337 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 WDR18Q9BV38 432 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 RAI14Q9P0K7 980 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 HERC5Q9UII4 1024 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 HDAC5Q9UQL6 1122 aa16.07■□□□□ 0.16
CLNS1A-207ENST00000527133 CCND3P30281 292 aaPredicted RBP16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 HOXA7P31268 230 aaPredicted RBP16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 BACE1P56817 501 aa16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 CCAR1Q8IX12 1150 aaKnown RBP16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 SPATA5Q8NB90 893 aa16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 MEIS3Q99687 375 aa16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 PRUNE2Q8WUY3 3088 aa16.06■□□□□ 0.16
CLNS1A-207ENST00000527133 ASNSP08243 561 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms