RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CMTR1Q8N1G2 835 aaKnown RBP20.31■□□□□ 0.84
USH1C-205ENST00000527020 CRACR2BQ8N4Y2 399 aaPredicted RBP20.31■□□□□ 0.84
USH1C-205ENST00000527020 JMYQ8N9B5 988 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 FAM84BQ96KN1 310 aaPredicted RBP20.31■□□□□ 0.84
USH1C-205ENST00000527020 GNL3LQ9NVN8 582 aaKnown RBP20.31■□□□□ 0.84
USH1C-205ENST00000527020 FAM13BQ9NYF5 915 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 CNTNAP4Q9C0A0 1308 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 MINDY4BA8MYZ0 360 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 TOB1P50616 345 aaPredicted RBP20.31■□□□□ 0.84
USH1C-205ENST00000527020 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
USH1C-205ENST00000527020 SLC10A5Q5PT55 438 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 WASF1Q92558 559 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 TUBE1Q9UJT0 475 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 KCNJ14Q9UNX9 436 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 RCAN1P53805 252 aa20.3■□□□□ 0.84
USH1C-205ENST00000527020 NCAPHQ15003 741 aa20.3■□□□□ 0.84
USH1C-205ENST00000527020 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
USH1C-205ENST00000527020 TMTC2Q8N394 836 aa20.3■□□□□ 0.84
USH1C-205ENST00000527020 FANCBQ8NB91 859 aa20.3■□□□□ 0.84
USH1C-205ENST00000527020 ERICH2A1L162 156 aa20.29■□□□□ 0.84
USH1C-205ENST00000527020 CUTAO60888 179 aa20.29■□□□□ 0.84
USH1C-205ENST00000527020 DYNLL1P63167 89 aaKnown RBP20.29■□□□□ 0.84
USH1C-205ENST00000527020 DIS3L2Q8IYB7 885 aaKnown RBP20.29■□□□□ 0.84
USH1C-205ENST00000527020 KLRK1P26718 216 aa20.29■□□□□ 0.84
USH1C-205ENST00000527020 TRIM22Q8IYM9 498 aa20.29■□□□□ 0.84
USH1C-205ENST00000527020 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
USH1C-205ENST00000527020 PDCL3Q9H2J4 239 aa20.29■□□□□ 0.84
USH1C-205ENST00000527020 TNKSO95271 1327 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 CAVIN4Q5BKX8 364 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 FBXO33Q7Z6M2 555 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 TSC1Q92574 1164 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 CYP2D7A0A087X1C5 515 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 DEXIO95424 95 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
USH1C-205ENST00000527020 SHISA4Q96DD7 197 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 UBAC1Q9BSL1 405 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 FOXP1Q9H334 677 aaPredicted RBP20.28■□□□□ 0.84
USH1C-205ENST00000527020 BTAF1O14981 1849 aa20.28■□□□□ 0.84
USH1C-205ENST00000527020 RGL2O15211 777 aa20.27■□□□□ 0.84
USH1C-205ENST00000527020 NUP133Q8WUM0 1156 aa20.27■□□□□ 0.84
USH1C-205ENST00000527020 ESR2Q92731 530 aa20.27■□□□□ 0.84
USH1C-205ENST00000527020 LAMB1P07942 1786 aa20.27■□□□□ 0.84
USH1C-205ENST00000527020 CCDC196A0A1B0GTZ2 297 aa20.27■□□□□ 0.83
USH1C-205ENST00000527020 CCZ1BP86790 482 aa20.27■□□□□ 0.83
USH1C-205ENST00000527020 CCZ1P86791 482 aaPredicted RBP20.27■□□□□ 0.83
USH1C-205ENST00000527020 PNOCQ13519 176 aa20.27■□□□□ 0.83
USH1C-205ENST00000527020 ISM2Q6H9L7 571 aa20.27■□□□□ 0.83
USH1C-205ENST00000527020 FILIP1Q7Z7B0 1213 aa20.27■□□□□ 0.83
USH1C-205ENST00000527020 METTL16Q86W50 562 aaKnown RBP20.27■□□□□ 0.83
USH1C-205ENST00000527020 ENAHQ8N8S7 591 aaPredicted RBP20.27■□□□□ 0.83
USH1C-205ENST00000527020 BRIP1Q9BX63 1249 aa20.27■□□□□ 0.83
USH1C-205ENST00000527020 HSD3B7Q9H2F3 369 aa20.27■□□□□ 0.83
USH1C-205ENST00000527020 NEMFO60524 1076 aa20.26■□□□□ 0.83
USH1C-205ENST00000527020 NR5A1Q13285 461 aa20.26■□□□□ 0.83
USH1C-205ENST00000527020 LONRF3Q496Y0 759 aa20.26■□□□□ 0.83
USH1C-205ENST00000527020 KRI1Q8N9T8 703 aaKnown RBP20.26■□□□□ 0.83
USH1C-205ENST00000527020 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
USH1C-205ENST00000527020 KCNH3Q9ULD8 1083 aa20.26■□□□□ 0.83
USH1C-205ENST00000527020 RIOK3O14730 519 aaKnown RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 FGRP09769 529 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 GRIN1Q05586 938 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 SAFBQ15424 915 aaKnown RBP eCLIP20.25■□□□□ 0.83
USH1C-205ENST00000527020 FOXP4Q8IVH2 680 aaPredicted RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 OXER1Q8TDS5 423 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 C16orf45Q96MC5 204 aaPredicted RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 XPO4Q9C0E2 1151 aaKnown RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 NARFQ9UHQ1 456 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 FBXO2Q9UK22 296 aaPredicted RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 CCDC88AQ3V6T2 1871 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 MAST2Q6P0Q8 1798 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 FUT2Q10981 343 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 KRBA2Q6ZNG9 492 aa20.25■□□□□ 0.83
USH1C-205ENST00000527020 NSUN4Q96CB9 384 aaKnown RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 ZSCAN10Q96SZ4 725 aaPredicted RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 OSBPL5Q9H0X9 879 aaPredicted RBP20.25■□□□□ 0.83
USH1C-205ENST00000527020 IKBKBO14920 756 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 GTF2E1P29083 439 aaPredicted RBP20.24■□□□□ 0.83
USH1C-205ENST00000527020 RPS8P62241 208 aaKnown RBP20.24■□□□□ 0.83
USH1C-205ENST00000527020 EVX2Q03828 476 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 ZNF710Q8N1W2 664 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 IFNKQ9P0W0 207 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 KIAA1551Q9HCM1 1747 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 SEMA3EO15041 775 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 PTPREP23469 700 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 PKN1Q16512 942 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 RILPL1Q5EBL4 403 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 SPECC1Q5M775 1068 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 RNF26Q9BY78 433 aaPredicted RBP20.24■□□□□ 0.83
USH1C-205ENST00000527020 PCDHB6Q9Y5E3 794 aa20.24■□□□□ 0.83
USH1C-205ENST00000527020 PRDM1O75626 825 aa20.23■□□□□ 0.83
USH1C-205ENST00000527020 SKILP12757 684 aa20.23■□□□□ 0.83
USH1C-205ENST00000527020 MDM2Q00987 491 aaPredicted RBP20.23■□□□□ 0.83
USH1C-205ENST00000527020 RC3H1Q5TC82 1133 aaKnown RBP20.23■□□□□ 0.83
USH1C-205ENST00000527020 USP27XA6NNY8 438 aa20.22■□□□□ 0.83
USH1C-205ENST00000527020 SMTNL1A8MU46 457 aa20.22■□□□□ 0.83
USH1C-205ENST00000527020 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
USH1C-205ENST00000527020 MECOMQ03112 1051 aa20.22■□□□□ 0.83
USH1C-205ENST00000527020 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
USH1C-205ENST00000527020 AMIGO3Q86WK7 504 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms