RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 NFKBIEO00221 500 aa24.07■■□□□ 1.44
SMCO4-203ENST00000526869 NPM3O75607 178 aaKnown RBP24.07■■□□□ 1.44
SMCO4-203ENST00000526869 POLR3DP05423 398 aaPredicted RBP24.07■■□□□ 1.44
SMCO4-203ENST00000526869 CDC42EP5Q6NZY7 148 aa24.07■■□□□ 1.44
SMCO4-203ENST00000526869 GBP4Q96PP9 640 aa24.07■■□□□ 1.44
SMCO4-203ENST00000526869 UBAC1Q9BSL1 405 aa24.07■■□□□ 1.44
SMCO4-203ENST00000526869 USP40Q9NVE5 1235 aa24.07■■□□□ 1.44
SMCO4-203ENST00000526869 HPS5Q9UPZ3 1129 aa24.07■■□□□ 1.44
SMCO4-203ENST00000526869 BCS1LQ9Y276 419 aa24.07■■□□□ 1.44
SMCO4-203ENST00000526869 WDHD1O75717 1129 aaPredicted RBP24.06■■□□□ 1.44
SMCO4-203ENST00000526869 HMGN5P82970 282 aaKnown RBP24.06■■□□□ 1.44
SMCO4-203ENST00000526869 APOA5Q6Q788 366 aa24.06■■□□□ 1.44
SMCO4-203ENST00000526869 GMLQ99445 158 aa24.06■■□□□ 1.44
SMCO4-203ENST00000526869 TAOK2Q9UL54 1235 aa24.06■■□□□ 1.44
SMCO4-203ENST00000526869 ZDHHC9Q9Y397 364 aa24.06■■□□□ 1.44
SMCO4-203ENST00000526869 SMIM22K7EJ46 135 aa24.05■■□□□ 1.44
SMCO4-203ENST00000526869 MMP14P50281 582 aa24.05■■□□□ 1.44
SMCO4-203ENST00000526869 PKP1Q13835 747 aa24.05■■□□□ 1.44
SMCO4-203ENST00000526869 WTAPQ15007 396 aa24.05■■□□□ 1.44
SMCO4-203ENST00000526869 SEC23AQ15436 765 aa24.05■■□□□ 1.44
SMCO4-203ENST00000526869 IQCA1Q86XH1 822 aa24.05■■□□□ 1.44
SMCO4-203ENST00000526869 NSUN7Q8NE18 718 aaKnown RBP24.05■■□□□ 1.44
SMCO4-203ENST00000526869 KIF3AQ9Y496 699 aa24.05■■□□□ 1.44
SMCO4-203ENST00000526869 CCDC69A6NI79 296 aa24.04■■□□□ 1.44
SMCO4-203ENST00000526869 PSMD14O00487 310 aa24.04■■□□□ 1.44
SMCO4-203ENST00000526869 RANBP6O60518 1105 aaKnown RBP24.04■■□□□ 1.44
SMCO4-203ENST00000526869 SYT1P21579 422 aa24.04■■□□□ 1.44
SMCO4-203ENST00000526869 CCDC178Q5BJE1 867 aa24.04■■□□□ 1.44
SMCO4-203ENST00000526869 C16orf86Q6ZW13 317 aa24.04■■□□□ 1.44
SMCO4-203ENST00000526869 AGBL3Q8NEM8 1001 aa24.04■■□□□ 1.44
SMCO4-203ENST00000526869 ZSCAN10Q96SZ4 725 aaPredicted RBP24.04■■□□□ 1.44
SMCO4-203ENST00000526869 SAP30BPQ9UHR5 308 aaKnown RBP24.04■■□□□ 1.44
SMCO4-203ENST00000526869 NAP1L2Q9ULW6 460 aaPredicted RBP24.04■■□□□ 1.44
SMCO4-203ENST00000526869 STX6O43752 255 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 SYNE3Q6ZMZ3 975 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 NFXL1Q6ZNB6 911 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 TTC6Q86TZ1 520 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 STK11IPQ8N1F8 1099 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 NLGN2Q8NFZ4 835 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 JDP2Q8WYK2 163 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 IDI2Q9BXS1 227 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 HDAC9Q9UKV0 1011 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 TNKSO95271 1327 aa24.03■■□□□ 1.44
SMCO4-203ENST00000526869 COL2A1P02458 1487 aaPredicted RBP24.02■■□□□ 1.44
SMCO4-203ENST00000526869 ZBTB43O43298 467 aa24.02■■□□□ 1.44
SMCO4-203ENST00000526869 RAD17O75943 681 aa24.02■■□□□ 1.44
SMCO4-203ENST00000526869 CTDNEP1O95476 244 aa24.02■■□□□ 1.44
SMCO4-203ENST00000526869 MCM4P33991 863 aa24.02■■□□□ 1.44
SMCO4-203ENST00000526869 PLCD1P51178 756 aa24.02■■□□□ 1.44
SMCO4-203ENST00000526869 EVX2Q03828 476 aa24.02■■□□□ 1.44
SMCO4-203ENST00000526869 OSBPL5Q9H0X9 879 aaPredicted RBP24.02■■□□□ 1.44
SMCO4-203ENST00000526869 SLC12A7Q9Y666 1083 aa24.02■■□□□ 1.44
SMCO4-203ENST00000526869 PTPDC1A2A3K4 754 aa24.01■■□□□ 1.43
SMCO4-203ENST00000526869 PRDM1O75626 825 aa24.01■■□□□ 1.43
SMCO4-203ENST00000526869 METAP2P50579 478 aaKnown RBP eCLIP24.01■■□□□ 1.43
SMCO4-203ENST00000526869 CCT2P78371 535 aaKnown RBP24.01■■□□□ 1.43
SMCO4-203ENST00000526869 ANP32EQ9BTT0 268 aa24.01■■□□□ 1.43
SMCO4-203ENST00000526869 SENP2Q9HC62 589 aa24.01■■□□□ 1.43
SMCO4-203ENST00000526869 NCOA5Q9HCD5 579 aaKnown RBP24.01■■□□□ 1.43
SMCO4-203ENST00000526869 DDX4Q9NQI0 724 aaKnown RBP24.01■■□□□ 1.43
SMCO4-203ENST00000526869 JAK2O60674 1132 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 CDKL5O76039 1030 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 ZSCAN22P10073 491 aaPredicted RBP24■■□□□ 1.43
SMCO4-203ENST00000526869 RBM5P52756 815 aaKnown RBP eCLIP24■■□□□ 1.43
SMCO4-203ENST00000526869 CXCL9Q07325 125 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 TNIP1Q15025 636 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 PPP2R5BQ15173 497 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 CFAP100Q494V2 611 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 LARP1BQ659C4 914 aaKnown RBP24■■□□□ 1.43
SMCO4-203ENST00000526869 CIAPIN1Q6FI81 312 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 CPLX2Q6PUV4 134 aaKnown RBP24■■□□□ 1.43
SMCO4-203ENST00000526869 ENAHQ8N8S7 591 aaPredicted RBP24■■□□□ 1.43
SMCO4-203ENST00000526869 DYNLL2Q96FJ2 89 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 ZKSCAN3Q9BRR0 538 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 MKNK2Q9HBH9 465 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 TCP11L1Q9NUJ3 509 aa24■■□□□ 1.43
SMCO4-203ENST00000526869 TSPY2A6NKD2 308 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 GOLGA8AA7E2F4 631 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 DDX11L8A8MPP1 907 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 PTMSP20962 102 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 MTMR14Q8NCE2 650 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 RGS22Q8NE09 1264 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 ANKS1AQ92625 1134 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 EHD4Q9H223 541 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 MTMR6Q9Y217 621 aa23.99■■□□□ 1.43
SMCO4-203ENST00000526869 CPLX1O14810 134 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 BAG4O95429 457 aaKnown RBP23.98■■□□□ 1.43
SMCO4-203ENST00000526869 RASA1P20936 1047 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 CDK8P49336 464 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 GABPAQ06546 454 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 PICALMQ13492 652 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 IFIT1BQ5T764 474 aaKnown RBP23.98■■□□□ 1.43
SMCO4-203ENST00000526869 ZNF654Q8IZM8 581 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 ZNF444Q8N0Y2 327 aaPredicted RBP23.98■■□□□ 1.43
SMCO4-203ENST00000526869 OGFOD1Q8N543 542 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 FAM184AQ8NB25 1140 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 DHX36Q9H2U1 1008 aaKnown RBP23.98■■□□□ 1.43
SMCO4-203ENST00000526869 SWAP70Q9UH65 585 aa23.98■■□□□ 1.43
SMCO4-203ENST00000526869 ENTPD3O75355 529 aa23.97■■□□□ 1.43
SMCO4-203ENST00000526869 HLA-DOAP06340 250 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms