RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SRCIN1Q9C0H9 1055 aa7.08□□□□□ -1.28
CSDE1-211ENST00000525970 PCOLCE2Q9UKZ9 415 aa7.08□□□□□ -1.28
CSDE1-211ENST00000525970 GNA15P30679 374 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 GSTT1P30711 240 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 ITGAEP38570 1179 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 SF3A1Q15459 793 aaKnown RBP7.07□□□□□ -1.28
CSDE1-211ENST00000525970 IFI16Q16666 785 aaKnown RBP7.07□□□□□ -1.28
CSDE1-211ENST00000525970 TMEM87AQ8NBN3 555 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 UBXN4Q92575 508 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 FRMD6Q96NE9 622 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 C12orf49Q9H741 205 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 TMEM39AQ9NV64 488 aa7.07□□□□□ -1.28
CSDE1-211ENST00000525970 GPN3Q9UHW5 284 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-211ENST00000525970 EIF4BP23588 611 aaKnown RBP7.06□□□□□ -1.28
CSDE1-211ENST00000525970 BNIP3Q12983 259 aa7.06□□□□□ -1.28
CSDE1-211ENST00000525970 PSMD2Q13200 908 aa7.06□□□□□ -1.28
CSDE1-211ENST00000525970 TTLL4Q14679 1199 aa7.06□□□□□ -1.28
CSDE1-211ENST00000525970 NT5DC4Q86YG4 428 aa7.06□□□□□ -1.28
CSDE1-211ENST00000525970 TINF2Q9BSI4 451 aa7.06□□□□□ -1.28
CSDE1-211ENST00000525970 ZC3H12CQ9C0D7 883 aaKnown RBP7.06□□□□□ -1.28
CSDE1-211ENST00000525970 FAM8A1Q9UBU6 413 aa7.06□□□□□ -1.28
CSDE1-211ENST00000525970 TMEM265A0A087WTH1 108 aa7.05□□□□□ -1.28
CSDE1-211ENST00000525970 RNGTTO60942 597 aaKnown RBP7.05□□□□□ -1.28
CSDE1-211ENST00000525970 CD8BP10966 210 aa7.05□□□□□ -1.28
CSDE1-211ENST00000525970 PDZD3Q86UT5 571 aa7.05□□□□□ -1.28
CSDE1-211ENST00000525970 FAM181AQ8N9Y4 354 aa7.05□□□□□ -1.28
CSDE1-211ENST00000525970 DUSP23Q9BVJ7 150 aa7.05□□□□□ -1.28
CSDE1-211ENST00000525970 TGIF2Q9GZN2 237 aa7.05□□□□□ -1.28
CSDE1-211ENST00000525970 RC3H2Q9HBD1 1191 aaKnown RBP7.05□□□□□ -1.28
CSDE1-211ENST00000525970 MRS2Q9HD23 443 aa7.05□□□□□ -1.28
CSDE1-211ENST00000525970 CARMIL2Q6F5E8 1435 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 CEACAM5P06731 702 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 USP17L7P0C7H9 530 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 ARHGAP27Q6ZUM4 889 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 SLC43A3Q8NBI5 491 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 KCNB2Q92953 911 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 RNF34Q969K3 372 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 HRASLS5Q96KN8 279 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 MBNL3Q9NUK0 354 aaKnown RBP7.04□□□□□ -1.28
CSDE1-211ENST00000525970 AK5Q9Y6K8 562 aa7.04□□□□□ -1.28
CSDE1-211ENST00000525970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-211ENST00000525970 RNASE1P07998 156 aaKnown RBP7.03□□□□□ -1.28
CSDE1-211ENST00000525970 CTSHP09668 335 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 HCLS1P14317 486 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-211ENST00000525970 ARNTP27540 789 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 OXCT1P55809 520 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 ERVK-24P63145 666 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 ZC3H12AQ5D1E8 599 aaKnown RBP7.03□□□□□ -1.28
CSDE1-211ENST00000525970 TPTE2Q6XPS3 522 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 SULF2Q8IWU5 870 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 FAM177A1Q8N128 213 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-211ENST00000525970 RNF214Q8ND24 703 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 C3orf58Q8NDZ4 430 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 PI4K2BQ8TCG2 481 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 TMEM40Q8WWA1 233 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 PUS7Q96PZ0 661 aaKnown RBP7.03□□□□□ -1.28
CSDE1-211ENST00000525970 EMILIN2Q9BXX0 1053 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 SNX11Q9Y5W9 270 aa7.03□□□□□ -1.28
CSDE1-211ENST00000525970 FBXO24O75426 580 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 LEFTY1O75610 366 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 FARP2O94887 1054 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-211ENST00000525970 NEFMP07197 916 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 ZNF76P36508 570 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 AOC3Q16853 763 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 ANGEL2Q5VTE6 544 aaKnown RBP7.02□□□□□ -1.29
CSDE1-211ENST00000525970 FAM168AQ92567 244 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 ISL2Q96A47 359 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 CEP44Q9C0F1 390 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 TNKS2Q9H2K2 1166 aa7.02□□□□□ -1.29
CSDE1-211ENST00000525970 NME2P22392 152 aa7.01□□□□□ -1.29
CSDE1-211ENST00000525970 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.01□□□□□ -1.29
CSDE1-211ENST00000525970 CRELD1Q96HD1 420 aa7.01□□□□□ -1.29
CSDE1-211ENST00000525970 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
CSDE1-211ENST00000525970 SSU72Q9NP77 194 aaKnown RBP7.01□□□□□ -1.29
CSDE1-211ENST00000525970 ADAMTS6Q9UKP5 1117 aa7.01□□□□□ -1.29
CSDE1-211ENST00000525970 PPM1HQ9ULR3 514 aa7.01□□□□□ -1.29
CSDE1-211ENST00000525970 TTF2Q9UNY4 1162 aaKnown RBP7.01□□□□□ -1.29
CSDE1-211ENST00000525970 U3KQE9 123 aa7.01□□□□□ -1.29
CSDE1-211ENST00000525970 ZNF648Q5T619 568 aaPredicted RBP7□□□□□ -1.29
CSDE1-211ENST00000525970 SLC23A3Q6PIS1 610 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 TOP6BLQ8N6T0 577 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 LRRN4CLQ8ND94 238 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 GMLQ99445 158 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 CBX8Q9HC52 389 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 CACNA2D2Q9NY47 1150 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 GTF2IRD1Q9UHL9 959 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 PLAGL2Q9UPG8 496 aa7□□□□□ -1.29
CSDE1-211ENST00000525970 IGF2BP3O00425 579 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSDE1-211ENST00000525970 ZNF252P-AS1Q0IIN9 211 aa6.99□□□□□ -1.29
CSDE1-211ENST00000525970 FLAD1Q8NFF5 587 aa6.99□□□□□ -1.29
CSDE1-211ENST00000525970 STK35Q8TDR2 534 aa6.99□□□□□ -1.29
CSDE1-211ENST00000525970 NECAB3Q96P71 396 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-211ENST00000525970 SAMM50Q9Y512 469 aa6.99□□□□□ -1.29
CSDE1-211ENST00000525970 DBX1A6NMT0 343 aa6.98□□□□□ -1.29
CSDE1-211ENST00000525970 CD96P40200 585 aa6.98□□□□□ -1.29
CSDE1-211ENST00000525970 PKN1Q16512 942 aa6.98□□□□□ -1.29
CSDE1-211ENST00000525970 MAP1SQ66K74 1059 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-211ENST00000525970 GPBAR1Q8TDU6 330 aa6.98□□□□□ -1.29
CSDE1-211ENST00000525970 ASB11Q8WXH4 323 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms