RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 ANKRD13AQ8IZ07 590 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 REXO1Q8N1G1 1221 aaKnown RBP7.09□□□□□ -1.27
USP47-206ENST00000525367 EHMT1Q9H9B1 1298 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 RAD18Q9NS91 495 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 REV1Q9UBZ9 1251 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 MKL2Q9ULH7 1088 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 AP4E1Q9UPM8 1137 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 KLF4O43474 513 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 GRK4P32298 578 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 NTF4P34130 210 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 ID3Q02535 119 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 BMS1Q14692 1282 aaKnown RBP7.08□□□□□ -1.28
USP47-206ENST00000525367 EXOSC6Q5RKV6 272 aaKnown RBP7.08□□□□□ -1.28
USP47-206ENST00000525367 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 GIMAP6Q6P9H5 292 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.08□□□□□ -1.28
USP47-206ENST00000525367 HDXQ7Z353 690 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 CKAP2LQ8IYA6 745 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 CELF2-AS1Q8N7Q2 184 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 HIRIP3Q9BW71 556 aaPredicted RBP7.08□□□□□ -1.28
USP47-206ENST00000525367 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 PRKAG3Q9UGI9 489 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 CADPSQ9ULU8 1353 aa7.08□□□□□ -1.28
USP47-206ENST00000525367 PRR36Q9H6K5 1346 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 RBAK-RBAKDNI3L0D1 243 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 ATE1O95260 518 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 NEFMP07197 916 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 ADH5P11766 374 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 PLCG1P19174 1290 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 RING1Q06587 406 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 TRIM28Q13263 835 aaKnown RBP7.07□□□□□ -1.28
USP47-206ENST00000525367 SERINC3Q13530 473 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 OVOS1Q6IE37 1185 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 OSBPL2Q9H1P3 480 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 ZSWIM4Q9H7M6 989 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 FBRSQ9HAH7 460 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 DISC1Q9NRI5 854 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 CRIM1Q9NZV1 1036 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 KLHL3Q9UH77 587 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 SNCAIPQ9Y6H5 919 aa7.07□□□□□ -1.28
USP47-206ENST00000525367 ANKRD62A6NC57 917 aa7.06□□□□□ -1.28
USP47-206ENST00000525367 FAM86C2PA6NEL3 165 aa7.06□□□□□ -1.28
USP47-206ENST00000525367 PGRP06401 933 aa7.06□□□□□ -1.28
USP47-206ENST00000525367 ELNP15502 786 aa7.06□□□□□ -1.28
USP47-206ENST00000525367 ZBTB37Q5TC79 503 aa7.06□□□□□ -1.28
USP47-206ENST00000525367 MICAL1Q8TDZ2 1067 aa7.06□□□□□ -1.28
USP47-206ENST00000525367 FANCD2OSQ96PS1 177 aa7.06□□□□□ -1.28
USP47-206ENST00000525367 UPK3BL1B0FP48 263 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 CHURC1-FNTBB4DL54 471 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 UPK3BL2E5RIL1 263 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 F8W735 103 aaPredicted RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 SLFN14P0C7P3 912 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 HCLS1P14317 486 aaPredicted RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 TTLL4Q14679 1199 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 ZYXQ15942 572 aaKnown RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 NUTM2GQ5VZR2 741 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 ACSF2Q96CM8 615 aaPredicted RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 CRBNQ96SW2 442 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 DPH2Q9BQC3 489 aaPredicted RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 CHMP4AQ9BY43 222 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
USP47-206ENST00000525367 RNF208Q9H0X6 261 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 ST7Q9NRC1 585 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 PICK1Q9NRD5 415 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 TJP2Q9UDY2 1190 aa7.05□□□□□ -1.28
USP47-206ENST00000525367 MEGF11A6BM72 1044 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 MEIS3P2A8K0S8 358 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 B2RBV5 119 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 TIAF1O95411 115 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 ACRP10323 421 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 POLR2BP30876 1174 aaKnown RBP7.04□□□□□ -1.28
USP47-206ENST00000525367 ERVK-24P63145 666 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 RAB33AQ14088 237 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 PPP2R5EQ16537 467 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 NKG7Q16617 165 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
USP47-206ENST00000525367 DIEXFQ68CQ4 756 aaKnown RBP7.04□□□□□ -1.28
USP47-206ENST00000525367 IGF2-ASQ6U949 168 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
USP47-206ENST00000525367 RBBP8NLQ8NC74 664 aaPredicted RBP7.04□□□□□ -1.28
USP47-206ENST00000525367 TMEM40Q8WWA1 233 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 WNT10AQ9GZT5 417 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 FAM105AQ9NUU6 356 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 ACTL7BQ9Y614 415 aa7.04□□□□□ -1.28
USP47-206ENST00000525367 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 C1QTNF9BB2RNN3 333 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 PREPP48147 710 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 SOX4Q06945 474 aaPredicted RBP7.03□□□□□ -1.28
USP47-206ENST00000525367 PRRT3Q5FWE3 981 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 ARSHQ5FYA8 562 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 LARP1BQ659C4 914 aaKnown RBP7.03□□□□□ -1.28
USP47-206ENST00000525367 DYMQ7RTS9 669 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 C2CD4AQ8NCU7 369 aaPredicted RBP7.03□□□□□ -1.28
USP47-206ENST00000525367 SMG8Q8ND04 991 aaKnown RBP7.03□□□□□ -1.28
USP47-206ENST00000525367 ATG4CQ96DT6 458 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 TRIM55Q9BYV6 548 aa7.03□□□□□ -1.28
USP47-206ENST00000525367 ACTR10Q9NZ32 417 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms