RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PLCD1P51178 756 aa14.43□□□□□ -0.1
CLN8-207ENST00000524258 GABPAQ06546 454 aa14.43□□□□□ -0.1
CLN8-207ENST00000524258 ERO1BQ86YB8 467 aa14.43□□□□□ -0.1
CLN8-207ENST00000524258 FOXP4Q8IVH2 680 aaPredicted RBP14.43□□□□□ -0.1
CLN8-207ENST00000524258 EVI5LQ96CN4 794 aa14.43□□□□□ -0.1
CLN8-207ENST00000524258 SEC62Q99442 399 aaKnown RBP14.43□□□□□ -0.1
CLN8-207ENST00000524258 PTPN18Q99952 460 aa14.43□□□□□ -0.1
CLN8-207ENST00000524258 CRNKL1Q9BZJ0 848 aaKnown RBP14.43□□□□□ -0.1
CLN8-207ENST00000524258 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
CLN8-207ENST00000524258 HERC5Q9UII4 1024 aaKnown RBP14.43□□□□□ -0.1
CLN8-207ENST00000524258 GSG1L2A8MUP6 293 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 M0R2C6 588 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 FOXP2O15409 715 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 CTNND1O60716 968 aaKnown RBP14.42□□□□□ -0.1
CLN8-207ENST00000524258 HSPA8P11142 646 aaKnown RBP14.42□□□□□ -0.1
CLN8-207ENST00000524258 USP5P45974 858 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 MOGSQ13724 837 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 SHROOM1Q2M3G4 852 aaPredicted RBP14.42□□□□□ -0.1
CLN8-207ENST00000524258 TICAM2Q86XR7 235 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
CLN8-207ENST00000524258 EHD4Q9H223 541 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 RNF186Q9NXI6 227 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 KCNH4Q9UQ05 1017 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 CSADQ9Y600 493 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 MYH7P12883 1935 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 LAMB1P07942 1786 aa14.42□□□□□ -0.1
CLN8-207ENST00000524258 IGF2BP3O00425 579 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLN8-207ENST00000524258 IRF6O14896 467 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 CYP2D6P10635 497 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 PTPRAP18433 802 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 PPATQ06203 517 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 PPIL2Q13356 520 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 TATDN1Q6P1N9 297 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 SCYL3Q8IZE3 742 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 BRI3BPQ8WY22 251 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLN8-207ENST00000524258 ATP8A2Q9NTI2 1148 aa14.41□□□□□ -0.1
CLN8-207ENST00000524258 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.41□□□□□ -0.1
CLN8-207ENST00000524258 MANSC4A6NHS7 340 aaPredicted RBP14.4□□□□□ -0.1
CLN8-207ENST00000524258 GPAA1O43292 621 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 GSPT1P15170 499 aaKnown RBP14.4□□□□□ -0.1
CLN8-207ENST00000524258 CAP2P40123 477 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 AIDAQ96BJ3 306 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 OTUD5Q96G74 571 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 FSD1Q9BTV5 496 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 CFHR5Q9BXR6 569 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 R3HDMLQ9H3Y0 253 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 EPB41L4AQ9HCS5 686 aaPredicted RBP14.4□□□□□ -0.1
CLN8-207ENST00000524258 SAGE1Q9NXZ1 904 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 AK9Q5TCS8 1911 aa14.4□□□□□ -0.1
CLN8-207ENST00000524258 SHMT1P34896 483 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 INHBEP58166 350 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 SLC4A8Q2Y0W8 1093 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 C12orf60Q5U649 245 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 CTR9Q6PD62 1173 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 CCDC84Q86UT8 332 aaPredicted RBP14.39□□□□□ -0.11
CLN8-207ENST00000524258 IFNL1Q8IU54 200 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 MCM9Q9NXL9 1143 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
CLN8-207ENST00000524258 SERPINB13Q9UIV8 391 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 AFG3L2Q9Y4W6 797 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 SLC4A4Q9Y6R1 1079 aa14.39□□□□□ -0.11
CLN8-207ENST00000524258 CYP2D7A0A087X1C5 515 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 USP17L21D6R901 530 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 CA12O43570 354 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 TRPA1O75762 1119 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 HLA-DOAP06340 250 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 CTCFP49711 727 aaPredicted RBP14.38□□□□□ -0.11
CLN8-207ENST00000524258 SREBF2Q12772 1141 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 SBK1Q52WX2 424 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 GIMAP6Q6P9H5 292 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 TTC6Q86TZ1 520 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 FAM227BQ96M60 508 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 TSKSQ9UJT2 592 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 MYH1P12882 1939 aa14.38□□□□□ -0.11
CLN8-207ENST00000524258 A0A0D9SFI3 127 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 CXCL11O14625 94 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 GTF2A2P52657 109 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 LBX1P52954 281 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
CLN8-207ENST00000524258 TTC22Q5TAA0 569 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 CCDC129Q6ZRS4 1044 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 SKAP1Q86WV1 359 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 ZHX2Q9Y6X8 837 aa14.37□□□□□ -0.11
CLN8-207ENST00000524258 PHIPQ8WWQ0 1821 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 PATL2C9JE40 543 aaKnown RBP14.36□□□□□ -0.11
CLN8-207ENST00000524258 POLR3DP05423 398 aaPredicted RBP14.36□□□□□ -0.11
CLN8-207ENST00000524258 SDSP20132 328 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 GUCY1A2P33402 732 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 CCL15Q16663 113 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 GPAT2Q6NUI2 795 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 CENPQQ7L2Z9 268 aaPredicted RBP14.36□□□□□ -0.11
CLN8-207ENST00000524258 FAM43AQ8N2R8 423 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 PRDM10Q9NQV6 1147 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
CLN8-207ENST00000524258 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms