RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 MYBBP1AQ9BQG0 1328 aaKnown RBP12.26□□□□□ -0.45
LAMA4-220ENST00000523765 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-220ENST00000523765 HHIPL2Q6UWX4 724 aa12.25□□□□□ -0.45
LAMA4-220ENST00000523765 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-220ENST00000523765 MYLIPQ8WY64 445 aa12.25□□□□□ -0.45
LAMA4-220ENST00000523765 COA7Q96BR5 231 aa12.25□□□□□ -0.45
LAMA4-220ENST00000523765 HMX1Q9NP08 348 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-220ENST00000523765 DAGLAQ9Y4D2 1042 aa12.25□□□□□ -0.45
LAMA4-220ENST00000523765 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
LAMA4-220ENST00000523765 ATAD5Q96QE3 1844 aa12.25□□□□□ -0.45
LAMA4-220ENST00000523765 XIRP2A4UGR9 3374 aa12.24□□□□□ -0.45
LAMA4-220ENST00000523765 TRIM75PA6NK02 468 aa12.24□□□□□ -0.45
LAMA4-220ENST00000523765 CAPN2P17655 700 aa12.24□□□□□ -0.45
LAMA4-220ENST00000523765 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
LAMA4-220ENST00000523765 FASTKD5Q7L8L6 764 aaKnown RBP12.24□□□□□ -0.45
LAMA4-220ENST00000523765 SCYL3Q8IZE3 742 aa12.24□□□□□ -0.45
LAMA4-220ENST00000523765 VGLL2Q8N8G2 317 aa12.24□□□□□ -0.45
LAMA4-220ENST00000523765 MRIQ9BWK5 157 aa12.24□□□□□ -0.45
LAMA4-220ENST00000523765 TTYH1Q9H313 450 aaPredicted RBP12.24□□□□□ -0.45
LAMA4-220ENST00000523765 TTC28Q96AY4 2481 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 FRAT2O75474 233 aaPredicted RBP12.23□□□□□ -0.45
LAMA4-220ENST00000523765 MAP3K21Q5TCX8 1036 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 ZNF697Q5TEC3 545 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 TBC1D22AQ8WUA7 517 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 SEMA6BQ9H3T3 888 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 BMP2KQ9NSY1 1161 aaPredicted RBP12.23□□□□□ -0.45
LAMA4-220ENST00000523765 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
LAMA4-220ENST00000523765 CACNA1FO60840 1977 aa12.22□□□□□ -0.45
LAMA4-220ENST00000523765 GRM8O00222 908 aa12.22□□□□□ -0.45
LAMA4-220ENST00000523765 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-220ENST00000523765 USP38Q8NB14 1042 aa12.22□□□□□ -0.45
LAMA4-220ENST00000523765 KLHDC4Q8TBB5 520 aa12.22□□□□□ -0.45
LAMA4-220ENST00000523765 DDTLA6NHG4 134 aaPredicted RBP12.21□□□□□ -0.45
LAMA4-220ENST00000523765 CYP2B6P20813 491 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 PRDX5P30044 214 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 CCND3P30281 292 aaPredicted RBP12.21□□□□□ -0.45
LAMA4-220ENST00000523765 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.45
LAMA4-220ENST00000523765 SHHQ15465 462 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 FAM110CQ1W6H9 321 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 C9orf50Q5SZB4 431 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 USP40Q9NVE5 1235 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 CHD9Q3L8U1 2897 aa12.21□□□□□ -0.45
LAMA4-220ENST00000523765 MYH2Q9UKX2 1941 aa12.21□□□□□ -0.46
LAMA4-220ENST00000523765 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
LAMA4-220ENST00000523765 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
LAMA4-220ENST00000523765 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
LAMA4-220ENST00000523765 RGS3P49796 1198 aa12.2□□□□□ -0.46
LAMA4-220ENST00000523765 CACNB2Q08289 660 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-220ENST00000523765 CCL14Q16627 93 aa12.2□□□□□ -0.46
LAMA4-220ENST00000523765 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
LAMA4-220ENST00000523765 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
LAMA4-220ENST00000523765 MAST3O60307 1309 aa12.19□□□□□ -0.46
LAMA4-220ENST00000523765 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-220ENST00000523765 FGFR2P21802 821 aa12.19□□□□□ -0.46
LAMA4-220ENST00000523765 RRP1BQ14684 758 aaKnown RBP12.19□□□□□ -0.46
LAMA4-220ENST00000523765 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
LAMA4-220ENST00000523765 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
LAMA4-220ENST00000523765 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
LAMA4-220ENST00000523765 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
LAMA4-220ENST00000523765 RLFQ13129 1914 aa12.18□□□□□ -0.46
LAMA4-220ENST00000523765 PDE8BO95263 885 aa12.18□□□□□ -0.46
LAMA4-220ENST00000523765 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
LAMA4-220ENST00000523765 ASCC2Q9H1I8 757 aaPredicted RBP12.18□□□□□ -0.46
LAMA4-220ENST00000523765 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
LAMA4-220ENST00000523765 TXNRD2Q9NNW7 524 aa12.18□□□□□ -0.46
LAMA4-220ENST00000523765 SIPA1L1O43166 1804 aa12.17□□□□□ -0.46
LAMA4-220ENST00000523765 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
LAMA4-220ENST00000523765 VAMP4O75379 141 aa12.17□□□□□ -0.46
LAMA4-220ENST00000523765 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
LAMA4-220ENST00000523765 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
LAMA4-220ENST00000523765 SENP6Q9GZR1 1112 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-220ENST00000523765 BICC1Q9H694 974 aaKnown RBP12.17□□□□□ -0.46
LAMA4-220ENST00000523765 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-220ENST00000523765 LRRFIP2Q9Y608 721 aaKnown RBP12.17□□□□□ -0.46
LAMA4-220ENST00000523765 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
LAMA4-220ENST00000523765 FOSL2P15408 326 aa12.16□□□□□ -0.46
LAMA4-220ENST00000523765 PLA2G5P39877 138 aa12.16□□□□□ -0.46
LAMA4-220ENST00000523765 HMGCS2P54868 508 aa12.16□□□□□ -0.46
LAMA4-220ENST00000523765 SPP2Q13103 211 aa12.16□□□□□ -0.46
LAMA4-220ENST00000523765 USP6NLQ92738 828 aa12.16□□□□□ -0.46
LAMA4-220ENST00000523765 FANCIQ9NVI1 1328 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 BDP1A6H8Y1 2624 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 GCLCP48506 637 aaPredicted RBP12.15□□□□□ -0.46
LAMA4-220ENST00000523765 Q3C1V9 767 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 ZSCAN29Q8IWY8 852 aaPredicted RBP12.15□□□□□ -0.46
LAMA4-220ENST00000523765 WWC1Q8IX03 1113 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 PROCA1Q8NCQ7 364 aaPredicted RBP12.15□□□□□ -0.46
LAMA4-220ENST00000523765 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
LAMA4-220ENST00000523765 IDI2Q9BXS1 227 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 PORCNQ9H237 461 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
LAMA4-220ENST00000523765 CHD7Q9P2D1 2997 aa12.15□□□□□ -0.47
LAMA4-220ENST00000523765 ENTPD3O75355 529 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 PYGBP11216 843 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 TIE1P35590 1138 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 RTP1P59025 263 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms