RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 IDI2Q9BXS1 227 aa14.49□□□□□ -0.09
SDCBP-211ENST00000523441 CEP126Q9P2H0 1117 aa14.49□□□□□ -0.09
SDCBP-211ENST00000523441 DENND2AQ9ULE3 1009 aa14.49□□□□□ -0.09
SDCBP-211ENST00000523441 GCLCP48506 637 aaPredicted RBP14.48□□□□□ -0.09
SDCBP-211ENST00000523441 LRRC26Q2I0M4 334 aa14.48□□□□□ -0.09
SDCBP-211ENST00000523441 CCAR1Q8IX12 1150 aaKnown RBP14.48□□□□□ -0.09
SDCBP-211ENST00000523441 GUCD1Q96NT3 240 aa14.48□□□□□ -0.09
SDCBP-211ENST00000523441 GJD2Q9UKL4 321 aa14.48□□□□□ -0.09
SDCBP-211ENST00000523441 FRMPD3Q5JV73 1810 aa14.48□□□□□ -0.09
SDCBP-211ENST00000523441 CAPN2P17655 700 aa14.47□□□□□ -0.09
SDCBP-211ENST00000523441 CCND3P30281 292 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-211ENST00000523441 RFX5P48382 616 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-211ENST00000523441 IRX3P78415 501 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-211ENST00000523441 PABPC4Q13310 644 aaKnown RBP eCLIP14.47□□□□□ -0.09
SDCBP-211ENST00000523441 CCL14Q16627 93 aa14.47□□□□□ -0.09
SDCBP-211ENST00000523441 PROCA1Q8NCQ7 364 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-211ENST00000523441 ZNF280CQ8ND82 737 aa14.47□□□□□ -0.09
SDCBP-211ENST00000523441 PAGR1Q9BTK6 254 aa14.47□□□□□ -0.09
SDCBP-211ENST00000523441 USP44Q9H0E7 712 aa14.47□□□□□ -0.09
SDCBP-211ENST00000523441 CWC22Q9HCG8 908 aaKnown RBP14.47□□□□□ -0.09
SDCBP-211ENST00000523441 OGDHLQ9ULD0 1010 aa14.47□□□□□ -0.09
SDCBP-211ENST00000523441 PA2G4Q9UQ80 394 aaKnown RBP14.47□□□□□ -0.09
SDCBP-211ENST00000523441 ZKSCAN1P17029 563 aaPredicted RBP14.46□□□□□ -0.09
SDCBP-211ENST00000523441 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
SDCBP-211ENST00000523441 CCDC102BQ68D86 513 aa14.46□□□□□ -0.09
SDCBP-211ENST00000523441 MRPL50Q8N5N7 158 aaKnown RBP14.46□□□□□ -0.09
SDCBP-211ENST00000523441 LBHD1Q9BQE6 289 aaPredicted RBP14.46□□□□□ -0.09
SDCBP-211ENST00000523441 NDUFB9Q9Y6M9 179 aa14.46□□□□□ -0.09
SDCBP-211ENST00000523441 RFX7Q2KHR2 1363 aa14.46□□□□□ -0.1
SDCBP-211ENST00000523441 MROH7-TTC4A0A0A0MT08 1334 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 GAKO14976 1311 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 TIMM10P62072 90 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 CACNB2Q08289 660 aaPredicted RBP14.45□□□□□ -0.1
SDCBP-211ENST00000523441 MTMR2Q13614 643 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 RASGRF1Q13972 1273 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 PDE3AQ14432 1141 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 RRP1BQ14684 758 aaKnown RBP14.45□□□□□ -0.1
SDCBP-211ENST00000523441 SLF2Q8IX21 1173 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 ZGPATQ8N5A5 531 aaKnown RBP14.45□□□□□ -0.1
SDCBP-211ENST00000523441 P2RX7Q99572 595 aaKnown RBP14.45□□□□□ -0.1
SDCBP-211ENST00000523441 NUDT12Q9BQG2 462 aa14.45□□□□□ -0.1
SDCBP-211ENST00000523441 SENP6Q9GZR1 1112 aaPredicted RBP14.45□□□□□ -0.1
SDCBP-211ENST00000523441 SALL1Q9NSC2 1324 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 USP17L5A8MUK1 530 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 MAP3K10Q02779 954 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 MECOMQ03112 1051 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 ZNF697Q5TEC3 545 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 WDR78Q5VTH9 848 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 FAM9BQ8IZU0 186 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 OSBPL5Q9H0X9 879 aaPredicted RBP14.44□□□□□ -0.1
SDCBP-211ENST00000523441 TMOD4Q9NZQ9 345 aa14.44□□□□□ -0.1
SDCBP-211ENST00000523441 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-211ENST00000523441 CNGA1P29973 690 aa14.43□□□□□ -0.1
SDCBP-211ENST00000523441 SHROOM1Q2M3G4 852 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-211ENST00000523441 SPTY2D1Q68D10 685 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-211ENST00000523441 TBC1D9Q6ZT07 1266 aa14.43□□□□□ -0.1
SDCBP-211ENST00000523441 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
SDCBP-211ENST00000523441 AS3MTQ9HBK9 375 aa14.43□□□□□ -0.1
SDCBP-211ENST00000523441 TXNRD2Q9NNW7 524 aa14.43□□□□□ -0.1
SDCBP-211ENST00000523441 MAST2Q6P0Q8 1798 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 LAMA2P24043 3122 aaKnown RBP14.42□□□□□ -0.1
SDCBP-211ENST00000523441 SEMA3EO15041 775 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 GDF11O95390 407 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 UBTFL1P0CB47 393 aaPredicted RBP14.42□□□□□ -0.1
SDCBP-211ENST00000523441 CAP2P40123 477 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 PI16Q6UXB8 463 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 GPRC5AQ8NFJ5 357 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 NEUROD6Q96NK8 337 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 PORCNQ9H237 461 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 RAI14Q9P0K7 980 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 DNAH12Q6ZR08 3092 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 EYSQ5T1H1 3165 aa14.42□□□□□ -0.1
SDCBP-211ENST00000523441 COL6A1P12109 1028 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 RHBDL3P58872 404 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 HERVK_113P62684 666 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 ZYXQ15942 572 aaKnown RBP14.41□□□□□ -0.1
SDCBP-211ENST00000523441 Q3C1V9 767 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 MAP3K21Q5TCX8 1036 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 TEX11Q8IYF3 940 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 MAFAQ8NHW3 353 aaPredicted RBP14.41□□□□□ -0.1
SDCBP-211ENST00000523441 SSH1Q8WYL5 1049 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SDCBP-211ENST00000523441 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 PRDM5Q9NQX1 630 aaPredicted RBP14.41□□□□□ -0.1
SDCBP-211ENST00000523441 MORF4L1Q9UBU8 362 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 PRKAG2Q9UGJ0 569 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 ATP11BQ9Y2G3 1177 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 SIPA1L1O43166 1804 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 PTPRCP08575 1304 aa14.41□□□□□ -0.1
SDCBP-211ENST00000523441 GPR75-ASB3A0A0A6YYF3 556 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 TBC1D12O60347 775 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 IL15P40933 162 aaPredicted RBP14.4□□□□□ -0.1
SDCBP-211ENST00000523441 RGS2P41220 211 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 JAG1P78504 1218 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 GORABQ5T7V8 394 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 LHX8Q68G74 356 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 GPR142Q7Z601 462 aa14.4□□□□□ -0.1
SDCBP-211ENST00000523441 SH3RF3Q8TEJ3 882 aaPredicted RBP14.4□□□□□ -0.1
SDCBP-211ENST00000523441 ZNF384Q8TF68 577 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms