RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SLC5A6Q9Y289 635 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 LIG3P49916 1009 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 RASIP1Q5U651 963 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 MCTP1Q6DN14 999 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 AGMOQ6ZNB7 445 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 TOP6BLQ8N6T0 577 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 FLCNQ8NFG4 579 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 MIR1-1HGQ9H1L0 117 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 PRDM10Q9NQV6 1147 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 TACC3Q9Y6A5 838 aa5.53□□□□□ -1.52
VPS13B-209ENST00000521559 TMEM265A0A087WTH1 108 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 PRAMEF27A3QJZ7 478 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 IGF2BP3O00425 579 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS13B-209ENST00000521559 PAX4O43316 350 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 ADAMTS4O75173 837 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 LRIG2O94898 1065 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 IFI16Q16666 785 aaKnown RBP5.52□□□□□ -1.53
VPS13B-209ENST00000521559 LRFN4Q6PJG9 635 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 CYFIP1Q7L576 1253 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 FBXO33Q7Z6M2 555 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 PLPPR2Q96GM1 343 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 WNT10AQ9GZT5 417 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 VAV3Q9UKW4 847 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 USP31Q70CQ4 1352 aa5.52□□□□□ -1.53
VPS13B-209ENST00000521559 EIF4G1Q04637 1599 aaKnown RBP5.51□□□□□ -1.53
VPS13B-209ENST00000521559 LEFTY1O75610 366 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 NTF4P34130 210 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 ETF1P62495 437 aaKnown RBP5.51□□□□□ -1.53
VPS13B-209ENST00000521559 PWP1Q13610 501 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 INPP5AQ14642 412 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 TSNAXIP1Q2TAA8 658 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 ZNF326Q5BKZ1 582 aaKnown RBP5.51□□□□□ -1.53
VPS13B-209ENST00000521559 WIPI1Q5MNZ9 446 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-209ENST00000521559 MEI1Q5TIA1 1274 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 HID1Q8IV36 788 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 MFSD2AQ8NA29 543 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 GAL3ST3Q96A11 431 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 CRELD1Q96HD1 420 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 SNX11Q9Y5W9 270 aa5.51□□□□□ -1.53
VPS13B-209ENST00000521559 ZBTB7CA1YPR0 619 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 GNAT3A8MTJ3 354 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 CEACAM5P06731 702 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 TAL1P17542 331 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-209ENST00000521559 CAP2P40123 477 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 OXCT1P55809 520 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 PRKCQQ04759 706 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 PTPN11Q06124 597 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-209ENST00000521559 PDE4BQ07343 736 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 MAP3K11Q16584 847 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 ZNF746Q6NUN9 644 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-209ENST00000521559 ARMCX6Q7L4S7 300 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 CCDC84Q86UT8 332 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-209ENST00000521559 ABI1Q8IZP0 508 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 BCL7CQ8WUZ0 217 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-209ENST00000521559 HRASLS5Q96KN8 279 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 FOXQ1Q9C009 403 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 RNF19AQ9NV58 838 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 VTI1BQ9UEU0 232 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 ADGRE2Q9UHX3 823 aa5.5□□□□□ -1.53
VPS13B-209ENST00000521559 RELL1Q8IUW5 271 aa5.49□□□□□ -1.53
VPS13B-209ENST00000521559 HOMEZQ8IX15 550 aa5.49□□□□□ -1.53
VPS13B-209ENST00000521559 PLD6Q8N2A8 252 aaKnown RBP5.49□□□□□ -1.53
VPS13B-209ENST00000521559 FAM181AQ8N9Y4 354 aa5.49□□□□□ -1.53
VPS13B-209ENST00000521559 PAK6Q9NQU5 681 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-209ENST00000521559 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-209ENST00000521559 MAPK8IP1Q9UQF2 711 aa5.49□□□□□ -1.53
VPS13B-209ENST00000521559 PCDHB5Q9Y5E4 795 aa5.49□□□□□ -1.53
VPS13B-209ENST00000521559 BAZ1AQ9NRL2 1556 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-209ENST00000521559 BPNT1O95861 308 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 CYP7A1P22680 504 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
VPS13B-209ENST00000521559 SEPT6Q14141 434 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 PLCL1Q15111 1095 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 AOC3Q16853 763 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-209ENST00000521559 COX4I2Q96KJ9 171 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 FAM161BQ96MY7 647 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 BCL2L13Q9BXK5 485 aa5.48□□□□□ -1.53
VPS13B-209ENST00000521559 TPX2Q9ULW0 747 aaKnown RBP5.48□□□□□ -1.53
VPS13B-209ENST00000521559 MROH2BQ7Z745 1585 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 GFRA2O00451 464 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 CTSHP09668 335 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 TFE3P19532 575 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-209ENST00000521559 ITIH2P19823 946 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 GRK4P32298 578 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 TXKP42681 527 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 LMNB2Q03252 620 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 SLBPQ14493 270 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS13B-209ENST00000521559 FAM214BQ7L5A3 538 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 PHC3Q8NDX5 983 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 ASB11Q8WXH4 323 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 JARID2Q92833 1246 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-209ENST00000521559 HEXIM2Q96MH2 286 aaKnown RBP5.47□□□□□ -1.53
VPS13B-209ENST00000521559 RSRP1Q9BUV0 290 aa5.47□□□□□ -1.53
VPS13B-209ENST00000521559 RSF1Q96T23 1441 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-209ENST00000521559 NCAPD3P42695 1498 aa5.46□□□□□ -1.53
VPS13B-209ENST00000521559 ATAD2BQ9ULI0 1458 aa5.46□□□□□ -1.53
VPS13B-209ENST00000521559 CC2D2AQ9P2K1 1620 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 BIN1O00499 593 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 EOMESO95936 686 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms