RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TXNDC11Q6PKC3 985 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 GK5Q6ZS86 529 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 FMR1NBQ8N0W7 255 aaPredicted RBP5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 C19orf47Q8N9M1 422 aaKnown RBP5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 PSMG3-AS1Q96PY0 264 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 DEPDC7Q96QD5 511 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 SSBP4Q9BWG4 385 aaPredicted RBP5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 KCNK4Q9NYG8 393 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 PCDHB14Q9Y5E9 798 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 CORINQ9Y5Q5 1042 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 SYNGAP1Q96PV0 1343 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 LOC100289279A0A1B0GTE1 492 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 H2AFB1P0C5Y9 115 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 IMPDH2P12268 514 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 MAOBP27338 520 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 RAC1P63000 192 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 GSTM4Q03013 218 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 DDR2Q16832 855 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 TNNI3KQ59H18 835 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 TMEM201Q5SNT2 666 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 MSL1Q68DK7 614 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 TXNRD3Q86VQ6 643 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 TAB3Q8N5C8 712 aaPredicted RBP5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 OR6P1Q8NGX9 317 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 PLPPR2Q96GM1 343 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 CBX8Q9HC52 389 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 TACC3Q9Y6A5 838 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 SNCAIPQ9Y6H5 919 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 LTBP3Q9NS15 1303 aa5.19□□□□□ -1.58
HMGN1P28-201ENST00000521340 SLC22A31A6NKX4 558 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 GRIN3BO60391 1043 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 HTR3BO95264 441 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 HSD3B2P26439 372 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 CDC25BP30305 580 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 MCM4P33991 863 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 RASGRF1Q13972 1273 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 POU4F3Q15319 338 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 PLEKHG4Q58EX7 1191 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 ARTNQ5T4W7 220 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 INTS3Q68E01 1043 aaKnown RBP5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 MRM1Q6IN84 353 aaKnown RBP5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 CPLX3Q8WVH0 158 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 GPATCH3Q96I76 525 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 ZC3H12CQ9C0D7 883 aaKnown RBP5.18□□□□□ -1.58
HMGN1P28-201ENST00000521340 SCO2A0A1W2PP80 73 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 DDX3YO15523 660 aaKnown RBP5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 CYP11A1P05108 521 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 HSP90B1P14625 803 aaKnown RBP5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 LIG1P18858 919 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 CABP4P57796 275 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 NRG1Q02297 640 aaPredicted RBP5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 SQSTM1Q13501 440 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 ZYXQ15942 572 aaKnown RBP5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 WIPI1Q5MNZ9 446 aaPredicted RBP5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 CDCP2Q5VXM1 449 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 TTC6Q86TZ1 520 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 FBXO11Q86XK2 927 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 TMEM40Q8WWA1 233 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 KCNB2Q92953 911 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 ATG4CQ96DT6 458 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 MRFAP1L1Q96HT8 127 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 FERD3LQ96RJ6 166 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 SRPK1Q96SB4 655 aaKnown RBP5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 DNAJC7Q99615 494 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 WDR18Q9BV38 432 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 CARD10Q9BWT7 1032 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 CNNM2Q9H8M5 875 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 ACTR10Q9NZ32 417 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 PCDHA4Q9UN74 947 aa5.17□□□□□ -1.58
HMGN1P28-201ENST00000521340 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 ANKRD62A6NC57 917 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 TNFRSF10CO14798 259 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 GJB6O95452 261 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 NME1P15531 152 aaKnown RBP5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 KLHL23Q8NBE8 558 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 SLC7A3Q8WY07 619 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 TP53INP1Q96A56 240 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 ZFP64Q9NPA5 681 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 REV1Q9UBZ9 1251 aa5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGN1P28-201ENST00000521340 COL17A1Q9UMD9 1497 aaPredicted RBP5.15□□□□□ -1.58
HMGN1P28-201ENST00000521340 B2RBV5 119 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 DLL1O00548 723 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 PDPK1O15530 556 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 EIF4EBP3O60516 100 aaPredicted RBP5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 BPNT1O95861 308 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 CAPNS1P04632 268 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 GUCY2CP25092 1073 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 NOS3P29474 1203 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 KIAA0907Q7Z7F0 614 aaPredicted RBP5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 WFDC8Q8IUA0 241 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 DTWD1Q8N5C7 304 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 DDX54Q8TDD1 881 aaKnown RBP5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 SH3TC2Q8TF17 1288 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 WFDC12Q8WWY7 111 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 KLHL6Q8WZ60 621 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 ACSF2Q96CM8 615 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms