RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 INPP5BP32019 993 aa13.9□□□□□ -0.18
SPIDR-212ENST00000519661 SREBF2Q12772 1141 aa13.9□□□□□ -0.18
SPIDR-212ENST00000519661 MIGA2Q7L4E1 593 aa13.9□□□□□ -0.18
SPIDR-212ENST00000519661 SCYL3Q8IZE3 742 aa13.9□□□□□ -0.18
SPIDR-212ENST00000519661 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
SPIDR-212ENST00000519661 ROBO3Q96MS0 1386 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 MBD4O95243 580 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 CHGBP05060 677 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 GNAT2P19087 354 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 PDE4AP27815 886 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 IRX6P78412 446 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-212ENST00000519661 PRKG1Q13976 671 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 TTC6Q86TZ1 520 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 MAPKAPK5Q8IW41 473 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 ZKSCAN4Q969J2 545 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-212ENST00000519661 OPTNQ96CV9 577 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 PRDM10Q9NQV6 1147 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 PALD1Q9ULE6 856 aa13.89□□□□□ -0.19
SPIDR-212ENST00000519661 CXCL11O14625 94 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 ALDH1A1P00352 501 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 PTPRAP18433 802 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 CAP2P40123 477 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 CTCFP49711 727 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-212ENST00000519661 GTF2A2P52657 109 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 MOGSQ13724 837 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 PAXIP1Q6ZW49 1069 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-212ENST00000519661 CENPQQ7L2Z9 268 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-212ENST00000519661 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-212ENST00000519661 ARMT1Q9H993 441 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 SERPINB13Q9UIV8 391 aa13.88□□□□□ -0.19
SPIDR-212ENST00000519661 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 IRF6O14896 467 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 FOXN1O15353 648 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 HLA-DOAP06340 250 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 USP5P45974 858 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
SPIDR-212ENST00000519661 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 C12orf60Q5U649 245 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 AIDAQ96BJ3 306 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 ELP3Q9H9T3 547 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPIDR-212ENST00000519661 HELLSQ9NRZ9 838 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 RNF186Q9NXI6 227 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 AFG3L2Q9Y4W6 797 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 ZMYM6O95789 1325 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
SPIDR-212ENST00000519661 FOXP2O15409 715 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 GPAA1O43292 621 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 ASNSP08243 561 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 HSPA8P11142 646 aaKnown RBP13.86□□□□□ -0.19
SPIDR-212ENST00000519661 PLCD1P51178 756 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 SNAPC2Q13487 334 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 SDR42E1Q8WUS8 393 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 PTPN18Q99952 460 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 FSD1Q9BTV5 496 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 ARPP21Q9UBL0 812 aaPredicted RBP13.86□□□□□ -0.19
SPIDR-212ENST00000519661 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 NAV1Q8NEY1 1877 aa13.86□□□□□ -0.19
SPIDR-212ENST00000519661 A0A0G2JLL6 359 aaPredicted RBP13.85□□□□□ -0.19
SPIDR-212ENST00000519661 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
SPIDR-212ENST00000519661 PRKAB2O43741 272 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 CETPP11597 493 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 SHMT1P34896 483 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 ALX1Q15699 326 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 SH3D19Q5HYK7 790 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 PRRT2Q7Z6L0 340 aaPredicted RBP13.85□□□□□ -0.19
SPIDR-212ENST00000519661 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 BRI3BPQ8WY22 251 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 SLC45A1Q9Y2W3 748 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 PHIPQ8WWQ0 1821 aa13.85□□□□□ -0.19
SPIDR-212ENST00000519661 MYH1P12882 1939 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 PATL2C9JE40 543 aaKnown RBP13.84□□□□□ -0.19
SPIDR-212ENST00000519661 M0R2C6 588 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
SPIDR-212ENST00000519661 SLURP2P0DP57 97 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 CTR9Q6PD62 1173 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 OTUD5Q96G74 571 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 BEGAINQ9BUH8 593 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 EPB41L4AQ9HCS5 686 aaPredicted RBP13.84□□□□□ -0.19
SPIDR-212ENST00000519661 PICK1Q9NRD5 415 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 SLC4A4Q9Y6R1 1079 aa13.84□□□□□ -0.19
SPIDR-212ENST00000519661 HIP1O00291 1037 aa13.83□□□□□ -0.2
SPIDR-212ENST00000519661 GSPT1P15170 499 aaKnown RBP13.83□□□□□ -0.2
SPIDR-212ENST00000519661 JAG1P78504 1218 aa13.83□□□□□ -0.2
SPIDR-212ENST00000519661 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.2
SPIDR-212ENST00000519661 ANKRD23Q86SG2 305 aa13.83□□□□□ -0.2
SPIDR-212ENST00000519661 ZBTB21Q9ULJ3 1066 aa13.83□□□□□ -0.2
SPIDR-212ENST00000519661 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 USP17L5A8MUK1 530 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 USP17L12C9JPN9 530 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 USP17L21D6R901 530 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 FGRP09769 529 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 GRM1Q13255 1194 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 OTUD7BQ6GQQ9 843 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms