RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	CYP2D6	P10635	497 aa		28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	SBK1	Q52WX2	424 aa		28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	KIAA1211	Q6ZU35	1233 aa		28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	FOXP4	Q8IVH2	680 aa	Predicted RBP	28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	DSCC1	Q9BVC3	393 aa		28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	SERPINB13	Q9UIV8	391 aa		28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	ABT1	Q9ULW3	272 aa	Known RBP	28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	ZMYM6	O95789	1325 aa		28.93	■■■□□ 2.22
PCM1-209	ENST00000518930	MINDY4B	A8MYZ0	360 aa		28.92	■■■□□ 2.22
PCM1-209	ENST00000518930	TBC1D12	O60347	775 aa		28.92	■■■□□ 2.22
PCM1-209	ENST00000518930	PLCD1	P51178	756 aa		28.92	■■■□□ 2.22
PCM1-209	ENST00000518930	ALX1	Q15699	326 aa		28.92	■■■□□ 2.22
PCM1-209	ENST00000518930	C12orf60	Q5U649	245 aa		28.92	■■■□□ 2.22
PCM1-209	ENST00000518930	CREBZF	Q9NS37	354 aa		28.92	■■■□□ 2.22
PCM1-209	ENST00000518930	FZD1	Q9UP38	647 aa		28.92	■■■□□ 2.22
PCM1-209	ENST00000518930	MYH8	P13535	1937 aa		28.91	■■■□□ 2.22
PCM1-209	ENST00000518930	CYP2D7	A0A087X1C5	515 aa		28.91	■■■□□ 2.22
PCM1-209	ENST00000518930	WRNIP1	Q96S55	665 aa		28.91	■■■□□ 2.22
PCM1-209	ENST00000518930	LAMA4	Q16363	1823 aa		28.9	■■■□□ 2.22
PCM1-209	ENST00000518930	FAM196B	A6NMK8	535 aa		28.9	■■■□□ 2.22
PCM1-209	ENST00000518930	USP2	O75604	605 aa	Predicted RBP	28.9	■■■□□ 2.22
PCM1-209	ENST00000518930	MAP3K11	Q16584	847 aa		28.9	■■■□□ 2.22
PCM1-209	ENST00000518930	MOB2	Q70IA6	237 aa		28.9	■■■□□ 2.22
PCM1-209	ENST00000518930	HUNK	P57058	714 aa		28.89	■■■□□ 2.22
PCM1-209	ENST00000518930	MAP3K10	Q02779	954 aa		28.89	■■■□□ 2.22
PCM1-209	ENST00000518930	METTL16	Q86W50	562 aa	Known RBP	28.89	■■■□□ 2.22
PCM1-209	ENST00000518930	ANO2	Q9NQ90	1003 aa		28.89	■■■□□ 2.22
PCM1-209	ENST00000518930	TAOK2	Q9UL54	1235 aa		28.89	■■■□□ 2.22
PCM1-209	ENST00000518930	TLL2	Q9Y6L7	1015 aa		28.89	■■■□□ 2.22
PCM1-209	ENST00000518930	ROBO3	Q96MS0	1386 aa		28.88	■■■□□ 2.21
PCM1-209	ENST00000518930	UBE2Q2L	H0YL09	131 aa		28.88	■■■□□ 2.21
PCM1-209	ENST00000518930	FGA	P02671	866 aa		28.88	■■■□□ 2.21
PCM1-209	ENST00000518930	SLC3A2	P08195	630 aa	Known RBP	28.88	■■■□□ 2.21
PCM1-209	ENST00000518930	KLRG1	Q96E93	195 aa		28.88	■■■□□ 2.21
PCM1-209	ENST00000518930	SWAP70	Q9UH65	585 aa		28.88	■■■□□ 2.21
PCM1-209	ENST00000518930	CTNNA3	Q9UI47	895 aa		28.88	■■■□□ 2.21
PCM1-209	ENST00000518930	SLURP2	P0DP57	97 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	HSPA6	P17066	643 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	PPARA	Q07869	468 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	SAPCD2	Q86UD0	394 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	ANKRD13A	Q8IZ07	590 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	DNAJC18	Q9H819	358 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	CSAD	Q9Y600	493 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	DOCK1	Q14185	1865 aa		28.87	■■■□□ 2.21
PCM1-209	ENST00000518930	MAP3K9	P80192	1104 aa		28.86	■■■□□ 2.21
PCM1-209	ENST00000518930	EVX2	Q03828	476 aa		28.86	■■■□□ 2.21
PCM1-209	ENST00000518930	ZNF112	Q9UJU3	913 aa		28.86	■■■□□ 2.21
PCM1-209	ENST00000518930		U3KPZ7	1027 aa	Predicted RBP	28.86	■■■□□ 2.21
PCM1-209	ENST00000518930	ATAD5	Q96QE3	1844 aa		28.85	■■■□□ 2.21
PCM1-209	ENST00000518930	UNCX	A6NJT0	531 aa		28.85	■■■□□ 2.21
PCM1-209	ENST00000518930	PTH1R	Q03431	593 aa		28.85	■■■□□ 2.21
PCM1-209	ENST00000518930	GABPA	Q06546	454 aa		28.85	■■■□□ 2.21
PCM1-209	ENST00000518930	C16orf86	Q6ZW13	317 aa		28.85	■■■□□ 2.21
PCM1-209	ENST00000518930	DYNLL2	Q96FJ2	89 aa		28.85	■■■□□ 2.21
PCM1-209	ENST00000518930	ZNF287	Q9HBT7	754 aa		28.84	■■■□□ 2.21
PCM1-209	ENST00000518930	PHF20L1	A8MW92	1017 aa		28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	ZNF213	O14771	459 aa		28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	INPP5B	P32019	993 aa		28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	VGLL4	Q14135	290 aa		28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	IMMT	Q16891	758 aa	Known RBP	28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	LDLRAD1	Q5T700	205 aa		28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	STK11IP	Q8N1F8	1099 aa		28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	SLC44A5	Q8NCS7	719 aa		28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	LSG1	Q9H089	658 aa	Known RBP	28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	28.83	■■■□□ 2.21
PCM1-209	ENST00000518930	SMIM22	K7EJ46	135 aa		28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	CTNND1	O60716	968 aa	Known RBP	28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	REC8	O95072	547 aa		28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	CDK8	P49336	464 aa		28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	HAND2	P61296	217 aa		28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	PDE4B	Q07343	736 aa		28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	TATDN1	Q6P1N9	297 aa		28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	ZKSCAN4	Q969J2	545 aa	Predicted RBP	28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	ANAPC4	Q9UJX5	808 aa		28.82	■■■□□ 2.2
PCM1-209	ENST00000518930	SHMT1	P34896	483 aa		28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	CERKL	Q49MI3	558 aa	Predicted RBP	28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	NOL9	Q5SY16	702 aa	Known RBP	28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	MAP4K1	Q92918	833 aa		28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	HHIPL1	Q96JK4	782 aa		28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	MKNK2	Q9HBH9	465 aa		28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	PICK1	Q9NRD5	415 aa		28.81	■■■□□ 2.2
PCM1-209	ENST00000518930	CAP2	P40123	477 aa		28.8	■■■□□ 2.2
PCM1-209	ENST00000518930	CTDSPL2	Q05D32	466 aa		28.8	■■■□□ 2.2
PCM1-209	ENST00000518930	RGMB	Q6NW40	437 aa		28.8	■■■□□ 2.2
PCM1-209	ENST00000518930	SCYL3	Q8IZE3	742 aa		28.8	■■■□□ 2.2
PCM1-209	ENST00000518930	CLMN	Q96JQ2	1002 aa		28.8	■■■□□ 2.2
PCM1-209	ENST00000518930	RBM8A	Q9Y5S9	174 aa	Known RBP	28.8	■■■□□ 2.2
PCM1-209	ENST00000518930	EIF5B	O60841	1220 aa	Known RBP	28.79	■■■□□ 2.2
PCM1-209	ENST00000518930	ZNF157	P51786	506 aa	Predicted RBP	28.79	■■■□□ 2.2
PCM1-209	ENST00000518930	SLC10A4	Q96EP9	437 aa		28.79	■■■□□ 2.2
PCM1-209	ENST00000518930	ELP3	Q9H9T3	547 aa		28.79	■■■□□ 2.2
PCM1-209	ENST00000518930	SNCAIP	Q9Y6H5	919 aa		28.79	■■■□□ 2.2
PCM1-209	ENST00000518930	RASSF10	A6NK89	507 aa		28.78	■■■□□ 2.2
PCM1-209	ENST00000518930	GDF11	O95390	407 aa		28.78	■■■□□ 2.2
PCM1-209	ENST00000518930	DEFB115	Q30KQ5	88 aa		28.78	■■■□□ 2.2
PCM1-209	ENST00000518930	RNF41	Q9H4P4	317 aa	Predicted RBP	28.78	■■■□□ 2.2
PCM1-209	ENST00000518930	HTRA3	P83110	453 aa		28.77	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms