RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 DNAJA1P31689 397 aaKnown RBP7.1□□□□□ -1.27
SQLE-202ENST00000518604 PREPP48147 710 aa7.1□□□□□ -1.27
SQLE-202ENST00000518604 NASPP49321 788 aaPredicted RBP7.1□□□□□ -1.27
SQLE-202ENST00000518604 USP11P51784 963 aa7.1□□□□□ -1.27
SQLE-202ENST00000518604 PPM1JQ5JR12 505 aa7.1□□□□□ -1.27
SQLE-202ENST00000518604 ZBTB37Q5TC79 503 aa7.1□□□□□ -1.27
SQLE-202ENST00000518604 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.1□□□□□ -1.27
SQLE-202ENST00000518604 PRKAG2Q9UGJ0 569 aa7.1□□□□□ -1.27
SQLE-202ENST00000518604 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
SQLE-202ENST00000518604 CSADQ9Y600 493 aa7.1□□□□□ -1.27
SQLE-202ENST00000518604 ACTL7BQ9Y614 415 aa7.1□□□□□ -1.27
SQLE-202ENST00000518604 CHRNA4P43681 627 aa7.09□□□□□ -1.27
SQLE-202ENST00000518604 ETF1P62495 437 aaKnown RBP7.09□□□□□ -1.27
SQLE-202ENST00000518604 LRRFIP1Q32MZ4 808 aaKnown RBP7.09□□□□□ -1.27
SQLE-202ENST00000518604 TMEM201Q5SNT2 666 aa7.09□□□□□ -1.27
SQLE-202ENST00000518604 ARMC5Q96C12 935 aa7.09□□□□□ -1.27
SQLE-202ENST00000518604 DRC1Q96MC2 740 aa7.09□□□□□ -1.27
SQLE-202ENST00000518604 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.09□□□□□ -1.274e-12■■□□□ 12.1
SQLE-202ENST00000518604 TANGO6Q9C0B7 1094 aa7.09□□□□□ -1.27
SQLE-202ENST00000518604 PCDHB14Q9Y5E9 798 aa7.09□□□□□ -1.27
SQLE-202ENST00000518604 PRAMEF27A3QJZ7 478 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 HTR3BO95264 441 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 FGRP09769 529 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 PLCG1P19174 1290 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 ATP2B1P20020 1258 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 GRK4P32298 578 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 CAP2P40123 477 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 GATA4P43694 442 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 TTLL4Q14679 1199 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 GK5Q6ZS86 529 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 CDC37L1Q7L3B6 337 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 HID1Q8IV36 788 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 SMYD4Q8IYR2 804 aaPredicted RBP7.08□□□□□ -1.28
SQLE-202ENST00000518604 EZH1Q92800 747 aaPredicted RBP7.08□□□□□ -1.28
SQLE-202ENST00000518604 UTP4Q969X6 686 aaKnown RBP7.08□□□□□ -1.28
SQLE-202ENST00000518604 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 SSBP4Q9BWG4 385 aaPredicted RBP7.08□□□□□ -1.28
SQLE-202ENST00000518604 ACSS3Q9H6R3 686 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 FAM105AQ9NUU6 356 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 PCOLCE2Q9UKZ9 415 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 ZNRF3Q9ULT6 936 aa7.08□□□□□ -1.28
SQLE-202ENST00000518604 DHX15O43143 795 aaKnown RBP7.07□□□□□ -1.28
SQLE-202ENST00000518604 PGRP06401 933 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 NTF4P34130 210 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 CLCQ05315 142 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 MAP7Q14244 749 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 MCF2L2Q86YR7 1114 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 RBBP8NLQ8NC74 664 aaPredicted RBP7.07□□□□□ -1.28
SQLE-202ENST00000518604 OR6P1Q8NGX9 317 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 CPLX3Q8WVH0 158 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 FERD3LQ96RJ6 166 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
SQLE-202ENST00000518604 SRRTQ9BXP5 876 aaKnown RBP7.07□□□□□ -1.28
SQLE-202ENST00000518604 GRIN3BO60391 1043 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 RNGTTO60942 597 aaKnown RBP7.06□□□□□ -1.28
SQLE-202ENST00000518604 SSBP05455 408 aaKnown RBP eCLIP7.06□□□□□ -1.28
SQLE-202ENST00000518604 NEFMP07197 916 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 BMP3P12645 472 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 HCLS1P14317 486 aaPredicted RBP7.06□□□□□ -1.28
SQLE-202ENST00000518604 SLC6A19Q695T7 634 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 FAM20CQ8IXL6 584 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 MRPL41Q8IXM3 137 aaKnown RBP7.06□□□□□ -1.28
SQLE-202ENST00000518604 ARMC10Q8N2F6 343 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 ISL2Q96A47 359 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 SSU72Q9NP77 194 aaKnown RBP7.06□□□□□ -1.28
SQLE-202ENST00000518604 REV1Q9UBZ9 1251 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 CORINQ9Y5Q5 1042 aa7.06□□□□□ -1.28
SQLE-202ENST00000518604 MEIS3P2A8K0S8 358 aa7.05□□□□□ -1.28
SQLE-202ENST00000518604 MAP4P27816 1152 aaKnown RBP7.05□□□□□ -1.28
SQLE-202ENST00000518604 EIF6P56537 245 aaKnown RBP7.05□□□□□ -1.28
SQLE-202ENST00000518604 CDPF1Q6NVV7 123 aa7.05□□□□□ -1.28
SQLE-202ENST00000518604 CLEC10AQ8IUN9 316 aa7.05□□□□□ -1.28
SQLE-202ENST00000518604 MCATQ8IVS2 390 aaKnown RBP7.05□□□□□ -1.28
SQLE-202ENST00000518604 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.05□□□□□ -1.28
SQLE-202ENST00000518604 GMIPQ9P107 970 aa7.05□□□□□ -1.28
SQLE-202ENST00000518604 PPT2Q9UMR5 302 aa7.05□□□□□ -1.28
SQLE-202ENST00000518604 GIPRP48546 466 aa7.04□□□□□ -1.28
SQLE-202ENST00000518604 YARSP54577 528 aaKnown RBP7.04□□□□□ -1.28
SQLE-202ENST00000518604 SGO2Q562F6 1265 aa7.04□□□□□ -1.28
SQLE-202ENST00000518604 FBLIM1Q8WUP2 373 aa7.04□□□□□ -1.28
SQLE-202ENST00000518604 TMEM87BQ96K49 555 aa7.04□□□□□ -1.28
SQLE-202ENST00000518604 SEMA6CQ9H3T2 930 aa7.04□□□□□ -1.28
SQLE-202ENST00000518604 TJP2Q9UDY2 1190 aa7.04□□□□□ -1.28
SQLE-202ENST00000518604 FAM95CA0A1B0GW59 222 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 SLC22A31A6NKX4 558 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 RAB6AP20340 208 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 RXRBP28702 533 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 PLA2G4EQ3MJ16 856 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 XP32Q5T750 250 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 SOGA3Q5TF21 947 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 CDCP2Q5VXM1 449 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 FBXW10Q5XX13 1052 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 INTS3Q68E01 1043 aaKnown RBP7.03□□□□□ -1.28
SQLE-202ENST00000518604 PAOXQ6QHF9 649 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 SLFN12Q8IYM2 578 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 TAB3Q8N5C8 712 aaPredicted RBP7.03□□□□□ -1.28
SQLE-202ENST00000518604 TMEM40Q8WWA1 233 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 UBXN4Q92575 508 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 ACSF2Q96CM8 615 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms