RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CCND3P30281 292 aaPredicted RBP4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 CABP4P57796 275 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 TLE2Q04725 743 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 SNX17Q15036 470 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 SMAD2Q15796 467 aaKnown RBP4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 VARS2Q5ST30 1063 aaKnown RBP4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 ASTLQ6HA08 431 aaPredicted RBP4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 APOBEC3FQ8IUX4 373 aaKnown RBP4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 NETO1Q8TDF5 533 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 TRIB2Q92519 343 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 COA7Q96BR5 231 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 LRIG1Q96JA1 1093 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 LMCD1Q9NZU5 365 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 KDM2AQ9Y2K7 1162 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 DAGLAQ9Y4D2 1042 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 PHIPQ8WWQ0 1821 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 ABCA2Q9BZC7 2435 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 TICRRQ7Z2Z1 1910 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 RPAP1Q9BWH6 1393 aaPredicted RBP4.65□□□□□ -1.66
SCARNA13-201ENST00000516672 NF1P21359 2839 aa4.65□□□□□ -1.66
SCARNA13-201ENST00000516672 DNM1LO00429 736 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 WNT10BO00744 389 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 PER1O15534 1290 aaPredicted RBP4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 ADRA1BP35368 520 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 MAP2K5Q13163 448 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 PPIGQ13427 754 aaKnown RBP eCLIP4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 DOK7Q18PE1 504 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 EML3Q32P44 896 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 PSRC1Q6PGN9 363 aaPredicted RBP4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 EP400NLQ6ZTU2 488 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 AGBL3Q8NEM8 1001 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 RBM17Q96I25 401 aaKnown RBP4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 CRAMP1Q96RY5 1269 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 ZNF330Q9Y3S2 320 aaPredicted RBP4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 RLFQ13129 1914 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 MYBBP1AQ9BQG0 1328 aaKnown RBP4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 RTL1A6NKG5 1358 aa4.65□□□□□ -1.67
SCARNA13-201ENST00000516672 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 RIMBP2O15034 1052 aa4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 SASH1O94885 1247 aa4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 RSBN1LQ6PCB5 846 aaPredicted RBP4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 ANKRD23Q86SG2 305 aa4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 GDPD5Q8WTR4 605 aa4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 DDX1Q92499 740 aaKnown RBP4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 UBL7Q96S82 380 aaPredicted RBP4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 DEFB129Q9H1M3 183 aa4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 TMEM39AQ9NV64 488 aa4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 A0A1W2PP64 1363 aa4.64□□□□□ -1.67
SCARNA13-201ENST00000516672 FRMPD3Q5JV73 1810 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 ARHGEF15O94989 841 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 CYP2C8P10632 490 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 TGM1P22735 817 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 GTF2E1P29083 439 aaPredicted RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 TAP1Q03518 808 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 CACNB2Q08289 660 aaPredicted RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 SNAPC2Q13487 334 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 WASHC4Q2M389 1173 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 TMEM67Q5HYA8 995 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 ZC3H14Q6PJT7 736 aaKnown RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 CCDC105Q8IYK2 499 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 SLC44A5Q8NCS7 719 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 GTF3C2Q8WUA4 911 aaPredicted RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 HNRNPLLQ8WVV9 542 aaKnown RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 MTIF3Q9H2K0 278 aaKnown RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 FZD8Q9H461 694 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 ZNF768Q9H5H4 540 aaKnown RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 RXFP3Q9NSD7 469 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 ANKMY1Q9P2S6 941 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 KTN1Q86UP2 1357 aaKnown RBP4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 CEMIPQ8WUJ3 1361 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 SPG11Q96JI7 2443 aa4.63□□□□□ -1.67
SCARNA13-201ENST00000516672 SETD2Q9BYW2 2564 aaPredicted RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 PCNX1Q96RV3 2341 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 APBB1O00213 710 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 MBTPS2O43462 519 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 HOXD8P13378 290 aaPredicted RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 CSF2RAP15509 400 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 SMPD1P17405 629 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 ELAVL4P26378 380 aaKnown RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 FOXC1Q12948 553 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 VGLL4Q14135 290 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 FAM50AQ14320 339 aaKnown RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 CLUL1Q15846 466 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 SUPT20HL1Q3ZLR7 823 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 GJC2Q5T442 439 aaPredicted RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 NBPF12Q5TAG4 269 aaPredicted RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 MFSD5Q6N075 450 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 SPRED2Q7Z698 418 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 PROSER1Q86XN7 944 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 SECISBP2LQ93073 1101 aaKnown RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 LIN37Q96GY3 246 aaPredicted RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 PARK7Q99497 189 aaKnown RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 PARD6AQ9NPB6 346 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 ABCC12Q96J65 1359 aa4.62□□□□□ -1.67
SCARNA13-201ENST00000516672 LOC730098B7Z3J9 87 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 BHMG1C9JSJ3 638 aaPredicted RBP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 IRF6O14896 467 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 TIMP1P01033 207 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms