RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 NCBP3Q53F19 620 aaKnown RBP18.56■□□□□ 0.56
TNPO1-210ENST00000515483 ANKRD44Q8N8A2 993 aa18.56■□□□□ 0.56
TNPO1-210ENST00000515483 SEMA6BQ9H3T3 888 aa18.56■□□□□ 0.56
TNPO1-210ENST00000515483 PRKAG2Q9UGJ0 569 aa18.56■□□□□ 0.56
TNPO1-210ENST00000515483 TBC1D12O60347 775 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 HMGCS2P54868 508 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 CACNB2Q08289 660 aaPredicted RBP18.55■□□□□ 0.56
TNPO1-210ENST00000515483 PDE3AQ14432 1141 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 LHX8Q68G74 356 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 SLF2Q8IX21 1173 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 ZGPATQ8N5A5 531 aaKnown RBP18.55■□□□□ 0.56
TNPO1-210ENST00000515483 KLHDC4Q8TBB5 520 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 OSBPL5Q9H0X9 879 aaPredicted RBP18.55■□□□□ 0.56
TNPO1-210ENST00000515483 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 PTPRFP10586 1907 aa18.55■□□□□ 0.56
TNPO1-210ENST00000515483 GAKO14976 1311 aa18.54■□□□□ 0.56
TNPO1-210ENST00000515483 COL9A1P20849 921 aa18.54■□□□□ 0.56
TNPO1-210ENST00000515483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.54■□□□□ 0.56
TNPO1-210ENST00000515483 SEMA3EO15041 775 aa18.53■□□□□ 0.56
TNPO1-210ENST00000515483 SLURP2P0DP57 97 aa18.53■□□□□ 0.56
TNPO1-210ENST00000515483 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
TNPO1-210ENST00000515483 PICALMQ13492 652 aa18.53■□□□□ 0.56
TNPO1-210ENST00000515483 GPRC5AQ8NFJ5 357 aa18.53■□□□□ 0.56
TNPO1-210ENST00000515483 DOCK2Q92608 1830 aa18.53■□□□□ 0.56
TNPO1-210ENST00000515483 RFX7Q2KHR2 1363 aa18.53■□□□□ 0.56
TNPO1-210ENST00000515483 EYSQ5T1H1 3165 aa18.52■□□□□ 0.56
TNPO1-210ENST00000515483 USP17L5A8MUK1 530 aa18.52■□□□□ 0.56
TNPO1-210ENST00000515483 EYA2O00167 538 aa18.52■□□□□ 0.56
TNPO1-210ENST00000515483 CCND3P30281 292 aaPredicted RBP18.52■□□□□ 0.56
TNPO1-210ENST00000515483 MAPK4P31152 587 aa18.52■□□□□ 0.56
TNPO1-210ENST00000515483 RGS2P41220 211 aa18.52■□□□□ 0.56
TNPO1-210ENST00000515483 SH3D19Q5HYK7 790 aa18.52■□□□□ 0.56
TNPO1-210ENST00000515483 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.56
TNPO1-210ENST00000515483 WDR63Q8IWG1 891 aa18.52■□□□□ 0.56
TNPO1-210ENST00000515483 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
TNPO1-210ENST00000515483 FAM163AQ96GL9 167 aaPredicted RBP18.52■□□□□ 0.56
TNPO1-210ENST00000515483 SENP6Q9GZR1 1112 aaPredicted RBP18.52■□□□□ 0.56
TNPO1-210ENST00000515483 DDX4Q9NQI0 724 aaKnown RBP18.52■□□□□ 0.56
TNPO1-210ENST00000515483 PRUNE2Q8WUY3 3088 aa18.52■□□□□ 0.55
TNPO1-210ENST00000515483 DOCK1Q14185 1865 aa18.52■□□□□ 0.55
TNPO1-210ENST00000515483 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
TNPO1-210ENST00000515483 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
TNPO1-210ENST00000515483 FOSL2P15408 326 aa18.5■□□□□ 0.55
TNPO1-210ENST00000515483 SMAD3P84022 425 aaKnown RBP18.5■□□□□ 0.55
TNPO1-210ENST00000515483 MYLIPQ8WY64 445 aa18.5■□□□□ 0.55
TNPO1-210ENST00000515483 USP6NLQ92738 828 aa18.5■□□□□ 0.55
TNPO1-210ENST00000515483 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
TNPO1-210ENST00000515483 HOXA7P31268 230 aaPredicted RBP18.49■□□□□ 0.55
TNPO1-210ENST00000515483 CAP2P40123 477 aa18.49■□□□□ 0.55
TNPO1-210ENST00000515483 BTDP43251 543 aa18.49■□□□□ 0.55
TNPO1-210ENST00000515483 ATP2B3Q16720 1220 aa18.49■□□□□ 0.55
TNPO1-210ENST00000515483 P2RX7Q99572 595 aaKnown RBP18.49■□□□□ 0.55
TNPO1-210ENST00000515483 APBA2Q99767 749 aa18.49■□□□□ 0.55
TNPO1-210ENST00000515483 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
TNPO1-210ENST00000515483 TNFRSF10AO00220 468 aa18.48■□□□□ 0.55
TNPO1-210ENST00000515483 ZBTB22O15209 634 aa18.48■□□□□ 0.55
TNPO1-210ENST00000515483 HERVK_113P62684 666 aa18.48■□□□□ 0.55
TNPO1-210ENST00000515483 SHHQ15465 462 aa18.48■□□□□ 0.55
TNPO1-210ENST00000515483 CCL14Q16627 93 aa18.48■□□□□ 0.55
TNPO1-210ENST00000515483 SPTY2D1Q68D10 685 aaPredicted RBP18.48■□□□□ 0.55
TNPO1-210ENST00000515483 CEP126Q9P2H0 1117 aa18.48■□□□□ 0.55
TNPO1-210ENST00000515483 FAM196BA6NMK8 535 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 MSCO60682 206 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 ATN1P54259 1190 aaPredicted RBP18.47■□□□□ 0.55
TNPO1-210ENST00000515483 TJAP1Q5JTD0 557 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 MORN1Q5T089 497 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 MFSD14CQ5VZR4 134 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 PLEKHH3Q7Z736 793 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 GTF3C2Q8WUA4 911 aaPredicted RBP18.47■□□□□ 0.55
TNPO1-210ENST00000515483 WDR18Q9BV38 432 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 CWC22Q9HCG8 908 aaKnown RBP18.47■□□□□ 0.55
TNPO1-210ENST00000515483 TXNRD2Q9NNW7 524 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 ABCF2Q9UG63 623 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 DNAH12Q6ZR08 3092 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 MYH13Q9UKX3 1938 aa18.47■□□□□ 0.55
TNPO1-210ENST00000515483 LOC285556D6RIA3 1793 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 MAP4K4O95819 1239 aaPredicted RBP18.46■□□□□ 0.55
TNPO1-210ENST00000515483 PHKA1P46020 1223 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 BACE1P56817 501 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 RTP1P59025 263 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 ERVK-24P63145 666 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 GPR142Q7Z601 462 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 TTYH1Q9H313 450 aaPredicted RBP18.46■□□□□ 0.55
TNPO1-210ENST00000515483 RBPJLQ9UBG7 517 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 FBXO3Q9UK99 471 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 MROH7-TTC4A0A0A0MT08 1334 aa18.46■□□□□ 0.55
TNPO1-210ENST00000515483 TMEM265A0A087WTH1 108 aa18.45■□□□□ 0.54
TNPO1-210ENST00000515483 GPR75-ASB3A0A0A6YYF3 556 aa18.45■□□□□ 0.54
TNPO1-210ENST00000515483 DNM1LO00429 736 aa18.45■□□□□ 0.54
TNPO1-210ENST00000515483 RFX5P48382 616 aaPredicted RBP18.45■□□□□ 0.54
TNPO1-210ENST00000515483 MTMR2Q13614 643 aa18.45■□□□□ 0.54
TNPO1-210ENST00000515483 LPAR1Q92633 364 aa18.45■□□□□ 0.54
TNPO1-210ENST00000515483 DDX20Q9UHI6 824 aaKnown RBP18.45■□□□□ 0.54
TNPO1-210ENST00000515483 C19orf81C9J6K1 198 aa18.44■□□□□ 0.54
TNPO1-210ENST00000515483 PEX10O60683 326 aa18.44■□□□□ 0.54
TNPO1-210ENST00000515483 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
TNPO1-210ENST00000515483 CIAO1O76071 339 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms