RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 DISP1Q96F81 1524 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 PLD2O14939 933 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 GRIN3BO60391 1043 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 RASGRP1O95267 797 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 F11P03951 625 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 ARNTP27540 789 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 GUCY2FP51841 1108 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 NRLP54845 237 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 FOXC1Q12948 553 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 LAMC2Q13753 1193 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 C4orf46Q504U0 113 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 UBR7Q8N806 425 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 ATL2Q8NHH9 583 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 NSUN5Q96P11 429 aaKnown RBP8.83□□□□□ -1
NPHP3-211ENST00000515289 TRERF1Q96PN7 1200 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 PBX4Q9BYU1 374 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 MUC3BQ9H195 1237 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 ANTXR1Q9H6X2 564 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 PHAXQ9H814 394 aaKnown RBP8.83□□□□□ -1
NPHP3-211ENST00000515289 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 SUSD5O60279 629 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 CPEP16870 476 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 OS9Q13438 667 aaPredicted RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 LBRQ14739 615 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 EFHC2Q5JST6 749 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 FIGNL1Q6PIW4 674 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 DHX32Q7L7V1 743 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 ZNF598Q86UK7 904 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 RIN3Q8TB24 985 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 GRIN3AQ8TCU5 1115 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 KISS1RQ969F8 398 aaPredicted RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 DYRK1BQ9Y463 629 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 KIAA0556O60303 1618 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 DNAJC25-GNG10A0A024R161 153 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 SHTN1A0MZ66 631 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 SCGB1D2O95969 90 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 ZNF252P-AS1Q0IIN9 211 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 INTS3Q68E01 1043 aaKnown RBP8.81□□□□□ -1
NPHP3-211ENST00000515289 STK35Q8TDR2 534 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 BSNDQ8WZ55 320 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 ASPSCR1Q9BZE9 553 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 CBX8Q9HC52 389 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 INTS7Q9NVH2 962 aaKnown RBP8.81□□□□□ -1
NPHP3-211ENST00000515289 PHLDB1Q86UU1 1377 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 ATXN7O15265 892 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 EYA4O95677 639 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 BMP2P12643 396 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 ZEB1P37275 1124 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 PTPN11Q06124 597 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 PCDH1Q08174 1060 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 RALBP1Q15311 655 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 LRRC41Q15345 812 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 UNC5AQ6ZN44 842 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 NECAB2Q7Z6G3 386 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 SAMD3Q8N6K7 520 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 SLC39A13Q96H72 371 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 TARS2Q9BW92 718 aaKnown RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 RASSF4Q9H2L5 321 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 ARNT2Q9HBZ2 717 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 CCNB3Q8WWL7 1395 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 LRRIQ1Q96JM4 1722 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 HTR3BO95264 441 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 RAPGEF3O95398 923 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 MYL1P05976 194 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 SMPD1P17405 629 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 NEK2P51955 445 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 MLECQ14165 292 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 MYO1HQ8N1T3 1032 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 UBE2Q2Q8WVN8 375 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 EVI5LQ96CN4 794 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 EXOC2Q96KP1 924 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 DHRS4Q9BTZ2 278 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 GMIPQ9P107 970 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 PCDHGC4Q9Y5F7 938 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 LTBP3Q9NS15 1303 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 KATNA1O75449 491 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 ACRP10323 421 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 ATF3P18847 181 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 L1CAMP32004 1257 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 CCNFP41002 786 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 GPLD1P80108 840 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 SPEM2Q0P670 501 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 ZYXQ15942 572 aaKnown RBP8.78□□□□□ -1
NPHP3-211ENST00000515289 ZNF423Q2M1K9 1284 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 FOXB2Q5VYV0 432 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 LRRTM3Q86VH5 581 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 CYP4X1Q8N118 509 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 MRPL4Q9BYD3 311 aaKnown RBP8.78□□□□□ -1
NPHP3-211ENST00000515289 HCSTQ9UBK5 93 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 MRPS23Q9Y3D9 190 aaKnown RBP8.78□□□□□ -1
NPHP3-211ENST00000515289 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1
NPHP3-211ENST00000515289 HECW1Q76N89 1606 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 ARHGEF11O15085 1522 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 MAGI3Q5TCQ9 1506 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 LOC102724428A0A0B4J2F2 783 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 HMGB1P1B2RPK0 211 aaPredicted RBP8.77□□□□□ -1.01
NPHP3-211ENST00000515289 AGRPO00253 132 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms