RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 CCDC84Q86UT8 332 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC11-210ENST00000513600 TACC3Q9Y6A5 838 aa10.26□□□□□ -0.77
TRAPPC11-210ENST00000513600 RBM47A0AV96 593 aaKnown RBP10.25□□□□□ -0.77
TRAPPC11-210ENST00000513600 FAM87AP0C7U9 286 aa10.25□□□□□ -0.77
TRAPPC11-210ENST00000513600 LMNB2Q03252 620 aa10.25□□□□□ -0.77
TRAPPC11-210ENST00000513600 TMEM74Q96NL1 305 aa10.25□□□□□ -0.77
TRAPPC11-210ENST00000513600 PSMG3-AS1Q96PY0 264 aa10.25□□□□□ -0.77
TRAPPC11-210ENST00000513600 WNT10AQ9GZT5 417 aa10.25□□□□□ -0.77
TRAPPC11-210ENST00000513600 GFRA2O00451 464 aa10.24□□□□□ -0.77
TRAPPC11-210ENST00000513600 HOXA10P31260 410 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC11-210ENST00000513600 CAMK2GQ13555 558 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC11-210ENST00000513600 NBPF11Q86T75 865 aa10.24□□□□□ -0.77
TRAPPC11-210ENST00000513600 DTX1Q86Y01 620 aa10.24□□□□□ -0.77
TRAPPC11-210ENST00000513600 JARID2Q92833 1246 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC11-210ENST00000513600 SPINK2P20155 84 aa10.23□□□□□ -0.77
TRAPPC11-210ENST00000513600 GBP2P32456 591 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC11-210ENST00000513600 CDK8P49336 464 aa10.23□□□□□ -0.77
TRAPPC11-210ENST00000513600 RPL6Q02878 288 aaKnown RBP10.23□□□□□ -0.77
TRAPPC11-210ENST00000513600 PF4P02776 101 aa10.22□□□□□ -0.77
TRAPPC11-210ENST00000513600 ETF1P62495 437 aaKnown RBP10.22□□□□□ -0.77
TRAPPC11-210ENST00000513600 RHOVQ96L33 236 aa10.22□□□□□ -0.77
TRAPPC11-210ENST00000513600 DUSP23Q9BVJ7 150 aa10.22□□□□□ -0.77
TRAPPC11-210ENST00000513600 LRRC4CQ9HCJ2 640 aa10.22□□□□□ -0.77
TRAPPC11-210ENST00000513600 F6X3S4 739 aa10.21□□□□□ -0.77
TRAPPC11-210ENST00000513600 ERMP1Q7Z2K6 904 aa10.21□□□□□ -0.77
TRAPPC11-210ENST00000513600 UBE3DQ7Z6J8 389 aa10.21□□□□□ -0.77
TRAPPC11-210ENST00000513600 TOP6BLQ8N6T0 577 aa10.21□□□□□ -0.77
TRAPPC11-210ENST00000513600 LEFTY1O75610 366 aa10.2□□□□□ -0.78
TRAPPC11-210ENST00000513600 LRIG2O94898 1065 aa10.2□□□□□ -0.78
TRAPPC11-210ENST00000513600 MSMPQ1L6U9 139 aa10.2□□□□□ -0.78
TRAPPC11-210ENST00000513600 XP32Q5T750 250 aa10.2□□□□□ -0.78
TRAPPC11-210ENST00000513600 HID1Q8IV36 788 aa10.2□□□□□ -0.78
TRAPPC11-210ENST00000513600 PRDM10Q9NQV6 1147 aa10.2□□□□□ -0.78
TRAPPC11-210ENST00000513600 BPNT1O95861 308 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 GRK4P32298 578 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 CAP2P40123 477 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 BNC2Q6ZN30 1099 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 ARMCX6Q7L4S7 300 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 HS2ST1Q7LGA3 356 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 TMEM87AQ8NBN3 555 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 GATAD2BQ8WXI9 593 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 KBTBD4Q9NVX7 518 aa10.19□□□□□ -0.78
TRAPPC11-210ENST00000513600 MINDY4BA8MYZ0 360 aa10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 CILPO75339 1184 aa10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 PDE4BQ07343 736 aa10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 SNAP47Q5SQN1 464 aa10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 FOXQ1Q9C009 403 aa10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 FBRSQ9HAH7 460 aa10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 BSDC1Q9NW68 430 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 ZC3H7BQ9UGR2 993 aaKnown RBP10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 GGT7Q9UJ14 662 aa10.18□□□□□ -0.78
TRAPPC11-210ENST00000513600 FAM221AA4D161 298 aa10.17□□□□□ -0.78
TRAPPC11-210ENST00000513600 F13A1P00488 732 aa10.17□□□□□ -0.78
TRAPPC11-210ENST00000513600 SLBPQ14493 270 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRAPPC11-210ENST00000513600 MKNK2Q9HBH9 465 aa10.17□□□□□ -0.78
TRAPPC11-210ENST00000513600 COPRSQ9NQ92 184 aa10.17□□□□□ -0.78
TRAPPC11-210ENST00000513600 WNT11O96014 354 aa10.16□□□□□ -0.78
TRAPPC11-210ENST00000513600 PRNPP04156 253 aa10.16□□□□□ -0.78
TRAPPC11-210ENST00000513600 FAM160A1Q05DH4 1040 aa10.16□□□□□ -0.78
TRAPPC11-210ENST00000513600 MFSD2AQ8NA29 543 aa10.16□□□□□ -0.78
TRAPPC11-210ENST00000513600 GOLM1Q8NBJ4 401 aa10.16□□□□□ -0.78
TRAPPC11-210ENST00000513600 PGRP06401 933 aa10.15□□□□□ -0.78
TRAPPC11-210ENST00000513600 NKG7Q16617 165 aa10.15□□□□□ -0.78
TRAPPC11-210ENST00000513600 LDLRAD1Q5T700 205 aa10.15□□□□□ -0.78
TRAPPC11-210ENST00000513600 ARHGAP27Q6ZUM4 889 aa10.15□□□□□ -0.78
TRAPPC11-210ENST00000513600 BACH2Q9BYV9 841 aa10.15□□□□□ -0.78
TRAPPC11-210ENST00000513600 GTF2IRD1Q9UHL9 959 aa10.15□□□□□ -0.78
TRAPPC11-210ENST00000513600 ADAM30Q9UKF2 790 aa10.15□□□□□ -0.78
TRAPPC11-210ENST00000513600 CST3P01034 146 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC11-210ENST00000513600 GARTP22102 1010 aa10.14□□□□□ -0.79
TRAPPC11-210ENST00000513600 VAMP1P23763 118 aa10.14□□□□□ -0.79
TRAPPC11-210ENST00000513600 KCNQ5Q9NR82 932 aa10.14□□□□□ -0.79
TRAPPC11-210ENST00000513600 ANGEL1Q9UNK9 670 aaKnown RBP10.14□□□□□ -0.79
TRAPPC11-210ENST00000513600 EIF4A3P38919 411 aaKnown RBP10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 MPP2Q14168 576 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 SLC6A19Q695T7 634 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 FAM196AQ6ZSG2 479 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 FAM214BQ7L5A3 538 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 VSIG10LQ86VR7 867 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 MRPL41Q8IXM3 137 aaKnown RBP10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 RGS22Q8NE09 1264 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 NETO1Q8TDF5 533 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 METTL5Q9NRN9 209 aaKnown RBP10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 CCDC9Q9Y3X0 531 aaKnown RBP10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 ROBO2Q9HCK4 1378 aa10.13□□□□□ -0.79
TRAPPC11-210ENST00000513600 IGF2BP3O00425 579 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 SLITRK5O94991 958 aa10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 ZNF76P36508 570 aa10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 OXCT1P55809 520 aa10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 PRAMEF13Q5VWM6 474 aa10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 FAM181AQ8N9Y4 354 aa10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 HEXIM2Q96MH2 286 aaKnown RBP10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 TJP2Q9UDY2 1190 aa10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 CCDC39Q9UFE4 941 aa10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
TRAPPC11-210ENST00000513600 ADAMTS4O75173 837 aa10.11□□□□□ -0.79
TRAPPC11-210ENST00000513600 EOMESO95936 686 aa10.11□□□□□ -0.79
TRAPPC11-210ENST00000513600 GP2P55259 537 aaKnown RBP10.11□□□□□ -0.79
TRAPPC11-210ENST00000513600 FBXL19Q6PCT2 694 aa10.11□□□□□ -0.79
TRAPPC11-210ENST00000513600 MCATQ8IVS2 390 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms