RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 KIAA0825Q8IV33 1275 aa8.84□□□□□ -0.99
CHD1-209ENST00000512844 ZNF428Q96B54 188 aa8.84□□□□□ -0.99
CHD1-209ENST00000512844 METTL22Q9BUU2 404 aaPredicted RBP8.84□□□□□ -0.99
CHD1-209ENST00000512844 OSBPL1AQ9BXW6 950 aa8.84□□□□□ -0.99
CHD1-209ENST00000512844 PRKAG2Q9UGJ0 569 aa8.84□□□□□ -0.99
CHD1-209ENST00000512844 MLECQ14165 292 aa8.83□□□□□ -1
CHD1-209ENST00000512844 MPP2Q14168 576 aa8.83□□□□□ -1
CHD1-209ENST00000512844 DUSP27Q5VZP5 1158 aa8.83□□□□□ -1
CHD1-209ENST00000512844 CYFIP1Q7L576 1253 aa8.83□□□□□ -1
CHD1-209ENST00000512844 ZNF296Q8WUU4 475 aaPredicted RBP8.83□□□□□ -1
CHD1-209ENST00000512844 SPON2Q9BUD6 331 aa8.83□□□□□ -1
CHD1-209ENST00000512844 WNT10AQ9GZT5 417 aa8.83□□□□□ -1
CHD1-209ENST00000512844 WDR64B1ANS9 1081 aa8.82□□□□□ -1
CHD1-209ENST00000512844 CILPO75339 1184 aa8.82□□□□□ -1
CHD1-209ENST00000512844 NEFMP07197 916 aa8.82□□□□□ -1
CHD1-209ENST00000512844 GRK4P32298 578 aa8.82□□□□□ -1
CHD1-209ENST00000512844 LDLRAD1Q5T700 205 aa8.82□□□□□ -1
CHD1-209ENST00000512844 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
CHD1-209ENST00000512844 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
CHD1-209ENST00000512844 ROBO2Q9HCK4 1378 aa8.82□□□□□ -1
CHD1-209ENST00000512844 TLR3O15455 904 aaKnown RBP8.81□□□□□ -1
CHD1-209ENST00000512844 PGRP06401 933 aa8.81□□□□□ -1
CHD1-209ENST00000512844 GRIK1P39086 918 aa8.81□□□□□ -1
CHD1-209ENST00000512844 APOBRQ0VD83 1088 aa8.81□□□□□ -1
CHD1-209ENST00000512844 CYP27C1Q4G0S4 372 aa8.81□□□□□ -1
CHD1-209ENST00000512844 ZAR1Q86SH2 424 aa8.81□□□□□ -1
CHD1-209ENST00000512844 HID1Q8IV36 788 aa8.81□□□□□ -1
CHD1-209ENST00000512844 SHKBP1Q8TBC3 707 aa8.81□□□□□ -1
CHD1-209ENST00000512844 PCDHGB7Q9Y5F8 929 aa8.81□□□□□ -1
CHD1-209ENST00000512844 CDK8P49336 464 aa8.8□□□□□ -1
CHD1-209ENST00000512844 RING1Q06587 406 aa8.8□□□□□ -1
CHD1-209ENST00000512844 CDK5R2Q13319 367 aa8.8□□□□□ -1
CHD1-209ENST00000512844 CPSF6Q16630 551 aaKnown RBP eCLIP8.8□□□□□ -1
CHD1-209ENST00000512844 ZNF394Q53GI3 561 aa8.8□□□□□ -1
CHD1-209ENST00000512844 FBXL19Q6PCT2 694 aa8.8□□□□□ -1
CHD1-209ENST00000512844 NT5DC4Q86YG4 428 aa8.8□□□□□ -1
CHD1-209ENST00000512844 LEMD3Q9Y2U8 911 aa8.8□□□□□ -1
CHD1-209ENST00000512844 FAM221AA4D161 298 aa8.79□□□□□ -1
CHD1-209ENST00000512844 GFRA2O00451 464 aa8.79□□□□□ -1
CHD1-209ENST00000512844 TCF3P15923 654 aa8.79□□□□□ -1
CHD1-209ENST00000512844 PLCG1P19174 1290 aa8.79□□□□□ -1
CHD1-209ENST00000512844 HDLBPQ00341 1268 aaKnown RBP8.79□□□□□ -1
CHD1-209ENST00000512844 C9orf131Q5VYM1 1079 aa8.79□□□□□ -1
CHD1-209ENST00000512844 ARHGAP27Q6ZUM4 889 aa8.79□□□□□ -1
CHD1-209ENST00000512844 REC114Q7Z4M0 266 aa8.79□□□□□ -1
CHD1-209ENST00000512844 CCSER2Q9H7U1 834 aa8.79□□□□□ -1
CHD1-209ENST00000512844 ADAMTS1Q9UHI8 967 aa8.79□□□□□ -1
CHD1-209ENST00000512844 DYNC1LI2O43237 492 aaPredicted RBP8.78□□□□□ -1
CHD1-209ENST00000512844 FAM87AP0C7U9 286 aa8.78□□□□□ -1
CHD1-209ENST00000512844 MCM4P33991 863 aa8.78□□□□□ -1
CHD1-209ENST00000512844 DDX41Q9UJV9 622 aaKnown RBP8.78□□□□□ -1
CHD1-209ENST00000512844 ADAM30Q9UKF2 790 aa8.78□□□□□ -1
CHD1-209ENST00000512844 LRIG2O94898 1065 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 F13BP05160 661 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 CHMP4BP1P59074 171 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 SEZ6Q53EL9 994 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 ARMCX6Q7L4S7 300 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 TOP6BLQ8N6T0 577 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 NKD1Q969G9 470 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 FOXQ1Q9C009 403 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 KCNQ5Q9NR82 932 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 C1GALT1Q9NS00 363 aa8.77□□□□□ -1.01
CHD1-209ENST00000512844 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.77□□□□□ -1.01
CHD1-209ENST00000512844 GRIN3BO60391 1043 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 GARTP22102 1010 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 ERCC5P28715 1186 aaPredicted RBP8.76□□□□□ -1.01
CHD1-209ENST00000512844 ADMP35318 185 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 ZNF165P49910 485 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 YARSP54577 528 aaKnown RBP8.76□□□□□ -1.01
CHD1-209ENST00000512844 ZMYM1Q5SVZ6 1142 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 OGFOD3Q6PK18 319 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 SEZ6L2Q6UXD5 910 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 MFSD2AQ8NA29 543 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 FBXO27Q8NI29 283 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 LRRC3Q9BY71 257 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 UBP1Q9NZI7 540 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 PIM2Q9P1W9 311 aa8.76□□□□□ -1.01
CHD1-209ENST00000512844 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 FAM170BA6NMN3 283 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 GREM1O60565 184 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 NTF4P34130 210 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 SLC6A19Q695T7 634 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 ZNF765Q7L2R6 523 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 ZDHHC13Q8IUH4 622 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 SPATA32Q96LK8 384 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 LRRC4CQ9HCJ2 640 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 PRDM10Q9NQV6 1147 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 GTF2IRD1Q9UHL9 959 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 RNF112Q9ULX5 631 aa8.75□□□□□ -1.01
CHD1-209ENST00000512844 CYP26A1O43174 497 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 PRAMEF13Q5VWM6 474 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 ZNF746Q6NUN9 644 aaPredicted RBP8.74□□□□□ -1.01
CHD1-209ENST00000512844 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
CHD1-209ENST00000512844 METTL16Q86W50 562 aaKnown RBP8.74□□□□□ -1.01
CHD1-209ENST00000512844 FAM13CQ8NE31 585 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 TMEM87BQ96K49 555 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 MIPEPQ99797 713 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 TGIF2Q9GZN2 237 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 FBRSQ9HAH7 460 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms