RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 EDC3Q96F86 508 aaKnown RBP8.95□□□□□ -0.98
NR1I3-231ENST00000512340 HELLSQ9NRZ9 838 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 DIAPH3Q9NSV4 1193 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 MCM9Q9NXL9 1143 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 SLC4A4Q9Y6R1 1079 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 FLT1P17948 1338 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 RFX7Q2KHR2 1363 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 ATRNL1Q5VV63 1379 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 GTF2A2P52657 109 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 DYNLL1P63167 89 aaKnown RBP8.94□□□□□ -0.98
NR1I3-231ENST00000512340 CASC1Q6TDU7 716 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 DLK2Q6UY11 383 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 PLEKHM2Q8IWE5 1019 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.94□□□□□ -0.98
NR1I3-231ENST00000512340 ZNF384Q8TF68 577 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 RIOK1Q9BRS2 568 aaKnown RBP8.94□□□□□ -0.98
NR1I3-231ENST00000512340 EHD4Q9H223 541 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 AS3MTQ9HBK9 375 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 CABP5Q9NP86 173 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 PPP4R2Q9NY27 417 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-231ENST00000512340 ARPP21Q9UBL0 812 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-231ENST00000512340 SWAP70Q9UH65 585 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 SERPINB13Q9UIV8 391 aa8.94□□□□□ -0.98
NR1I3-231ENST00000512340 TCRBV5S4A2TA0A5A2 114 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 ASNSP08243 561 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 CETPP11597 493 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 TDO2P48775 406 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 PPATQ06203 517 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 SNAPC2Q13487 334 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 VGLL4Q14135 290 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 MCMDC2Q4G0Z9 681 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 PPP4R3BQ5MIZ7 849 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 NOL9Q5SY16 702 aaKnown RBP8.93□□□□□ -0.98
NR1I3-231ENST00000512340 SPRYD7Q5W111 196 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 MOB2Q70IA6 237 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 ADGRA1Q86SQ6 560 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 RASAL3Q86YV0 1011 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 SCYL3Q8IZE3 742 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 OTUD7AQ8TE49 926 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-231ENST00000512340 WNK4Q96J92 1243 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 ARMT1Q9H993 441 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 ELP3Q9H9T3 547 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 DDX4Q9NQI0 724 aaKnown RBP8.93□□□□□ -0.98
NR1I3-231ENST00000512340 SAP30BPQ9UHR5 308 aaKnown RBP8.93□□□□□ -0.98
NR1I3-231ENST00000512340 ZNF112Q9UJU3 913 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 PALD1Q9ULE6 856 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 SALL3Q9BXA9 1300 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 DOCK2Q92608 1830 aa8.93□□□□□ -0.98
NR1I3-231ENST00000512340 MYH7P12883 1935 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 DDTLA6NHG4 134 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-231ENST00000512340 SPDYE5A6NIY4 337 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 PATL2C9JE40 543 aaKnown RBP8.92□□□□□ -0.98
NR1I3-231ENST00000512340 GPAA1O43292 621 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 KIF23Q02241 960 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-231ENST00000512340 MAP3K10Q02779 954 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 PPIL2Q13356 520 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 FASTKD5Q7L8L6 764 aaKnown RBP8.92□□□□□ -0.98
NR1I3-231ENST00000512340 LCORLQ8N3X6 602 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 OPTNQ96CV9 577 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 OTUD5Q96G74 571 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 STRBPQ96SI9 672 aaKnown RBP8.92□□□□□ -0.98
NR1I3-231ENST00000512340 NAPBQ9H115 298 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 SAGE1Q9NXZ1 904 aa8.92□□□□□ -0.98
NR1I3-231ENST00000512340 USP17L5A8MUK1 530 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 CXCL11O14625 94 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 SDSP20132 328 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 PDE4BQ07343 736 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 PABPC4Q13310 644 aaKnown RBP eCLIP8.91□□□□□ -0.98
NR1I3-231ENST00000512340 ARHGEF6Q15052 776 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 CERKLQ49MI3 558 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-231ENST00000512340 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 TTC22Q5TAA0 569 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-231ENST00000512340 ZFPM1Q8IX07 1006 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 ZKSCAN4Q969J2 545 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-231ENST00000512340 CLMNQ96JQ2 1002 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 CCDC17Q96LX7 622 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 PUS7LQ9H0K6 701 aaKnown RBP8.91□□□□□ -0.98
NR1I3-231ENST00000512340 SH2D4AQ9H788 454 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 MKNK2Q9HBH9 465 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 DCP1AQ9NPI6 582 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-231ENST00000512340 CTNNA3Q9UI47 895 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 GTF3C3Q9Y5Q9 886 aa8.91□□□□□ -0.98
NR1I3-231ENST00000512340 MYO5AQ9Y4I1 1855 aaKnown RBP8.9□□□□□ -0.98
NR1I3-231ENST00000512340 FAM155AB1AL88 458 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-231ENST00000512340 USP17L12C9JPN9 530 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 USP17L21D6R901 530 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 AOC2O75106 756 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 INPP5BP32019 993 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 CAP2P40123 477 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 TM4SF4P48230 202 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 NT5C2P49902 561 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 MKRN3Q13064 507 aaKnown RBP8.9□□□□□ -0.98
NR1I3-231ENST00000512340 ABCB5Q2M3G0 1257 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 SBK1Q52WX2 424 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 KIAA1211Q6ZU35 1233 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 SH3BP5LQ7L8J4 393 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 METTL16Q86W50 562 aaKnown RBP8.9□□□□□ -0.98
NR1I3-231ENST00000512340 SDR42E1Q8WUS8 393 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms