RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 NDUFB9Q9Y6M9 179 aa12.43□□□□□ -0.42
HOXA4-203ENST00000511914 CENPFP49454 3210 aa12.43□□□□□ -0.42
HOXA4-203ENST00000511914 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
HOXA4-203ENST00000511914 SNAP23O00161 211 aa12.42□□□□□ -0.42
HOXA4-203ENST00000511914 FKTNO75072 461 aa12.42□□□□□ -0.42
HOXA4-203ENST00000511914 KRT32Q14532 448 aa12.42□□□□□ -0.42
HOXA4-203ENST00000511914 ZNF589Q86UQ0 364 aaPredicted RBP12.42□□□□□ -0.42
HOXA4-203ENST00000511914 APOBEC3FQ8IUX4 373 aaKnown RBP12.42□□□□□ -0.42
HOXA4-203ENST00000511914 PIH1D3Q9NQM4 214 aaKnown RBP12.42□□□□□ -0.42
HOXA4-203ENST00000511914 PCDHAC2Q9Y5I4 1007 aa12.42□□□□□ -0.42
HOXA4-203ENST00000511914 RBM8AQ9Y5S9 174 aaKnown RBP12.42□□□□□ -0.42
HOXA4-203ENST00000511914 OTOFQ9HC10 1997 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 PSMA5P28066 241 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 GYG1P46976 350 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 SLC9C2Q5TAH2 1124 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 FBXO46Q6PJ61 603 aaPredicted RBP12.41□□□□□ -0.42
HOXA4-203ENST00000511914 PI16Q6UXB8 463 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 ZNF804AQ7Z570 1209 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 ZGPATQ8N5A5 531 aaKnown RBP12.41□□□□□ -0.42
HOXA4-203ENST00000511914 OSBP2Q969R2 916 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 JAG2Q9Y219 1238 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 SNX14Q9Y5W7 946 aa12.41□□□□□ -0.42
HOXA4-203ENST00000511914 MAST3O60307 1309 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 SALL1Q9NSC2 1324 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 SSC5DA1L4H1 1573 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 TCRBV5S4A2TA0A5A2 114 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
HOXA4-203ENST00000511914 IDH1O75874 414 aaKnown RBP12.4□□□□□ -0.42
HOXA4-203ENST00000511914 PDE6AP16499 860 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 DLGAP5Q15398 846 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 SPRYD7Q5W111 196 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 SPTY2D1Q68D10 685 aaPredicted RBP12.4□□□□□ -0.42
HOXA4-203ENST00000511914 TDRD7Q8NHU6 1098 aaKnown RBP12.4□□□□□ -0.42
HOXA4-203ENST00000511914 CLMNQ96JQ2 1002 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 DEFB129Q9H1M3 183 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 CD209Q9NNX6 404 aa12.4□□□□□ -0.42
HOXA4-203ENST00000511914 RPAP1Q9BWH6 1393 aaPredicted RBP12.4□□□□□ -0.42
HOXA4-203ENST00000511914 CLRN2A0PK11 232 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 SLC27A2O14975 620 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 GNAT2P19087 354 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 NEK4P51957 841 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 ALX1Q15699 326 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 LDLRAD1Q5T700 205 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 CERS5Q8N5B7 392 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 SLC10A4Q96EP9 437 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 ALDH8A1Q9H2A2 487 aaPredicted RBP12.39□□□□□ -0.43
HOXA4-203ENST00000511914 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 LRP2BPQ9P2M1 347 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 TRIM17Q9Y577 477 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 BRCA2P51587 3418 aa12.39□□□□□ -0.43
HOXA4-203ENST00000511914 ZNF532Q9HCE3 1301 aa12.38□□□□□ -0.43
HOXA4-203ENST00000511914 MKI67P46013 3256 aaKnown RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 FRAT2O75474 233 aaPredicted RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 HMGB1P09429 215 aaKnown RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 HSPD1P10809 573 aaKnown RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 IL1R1P14778 569 aa12.38□□□□□ -0.43
HOXA4-203ENST00000511914 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 ZBED3Q96IU2 234 aaPredicted RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 VEZTQ9HBM0 779 aa12.38□□□□□ -0.43
HOXA4-203ENST00000511914 HTTP42858 3142 aa12.38□□□□□ -0.43
HOXA4-203ENST00000511914 COL1A1P02452 1464 aaPredicted RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
HOXA4-203ENST00000511914 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 M0R2C6 588 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 IGF2BP3O00425 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
HOXA4-203ENST00000511914 GPAA1O43292 621 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
HOXA4-203ENST00000511914 CFAP100Q494V2 611 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 VPS53Q5VIR6 699 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 WNK4Q96J92 1243 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 PUS7LQ9H0K6 701 aaKnown RBP12.37□□□□□ -0.43
HOXA4-203ENST00000511914 CYP46A1Q9Y6A2 500 aa12.37□□□□□ -0.43
HOXA4-203ENST00000511914 MANSC4A6NHS7 340 aaPredicted RBP12.36□□□□□ -0.43
HOXA4-203ENST00000511914 MYO1BO43795 1136 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 PPP1R12BO60237 982 aaPredicted RBP12.36□□□□□ -0.43
HOXA4-203ENST00000511914 ALDH1A1P00352 501 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 PYGBP11216 843 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 MMP14P50281 582 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 NBPF12Q5TAG4 269 aaPredicted RBP12.36□□□□□ -0.43
HOXA4-203ENST00000511914 CCDC129Q6ZRS4 1044 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 PRMT6Q96LA8 375 aaPredicted RBP12.36□□□□□ -0.43
HOXA4-203ENST00000511914 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
HOXA4-203ENST00000511914 CFHR5Q9BXR6 569 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 SUGT1Q9Y2Z0 365 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 DOCK2Q92608 1830 aa12.36□□□□□ -0.43
HOXA4-203ENST00000511914 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
HOXA4-203ENST00000511914 CHGBP05060 677 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
HOXA4-203ENST00000511914 GJA5P36382 358 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms