RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
POLR2J3-216ENST00000511773 TRIB2Q92519 343 aa16.45■□□□□ 0.22
POLR2J3-216ENST00000511773 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.22
POLR2J3-216ENST00000511773 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
POLR2J3-216ENST00000511773 CIAO1O76071 339 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 CYP2B6P20813 491 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 RASGRF1Q13972 1273 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 CCDC102BQ68D86 513 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 SLF2Q8IX21 1173 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 ZNF280CQ8ND82 737 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 MROH7-TTC4A0A0A0MT08 1334 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 PFASO15067 1338 aa16.44■□□□□ 0.22
POLR2J3-216ENST00000511773 PEX10O60683 326 aa16.43■□□□□ 0.22
POLR2J3-216ENST00000511773 COL25A1Q9BXS0 654 aaPredicted RBP16.43■□□□□ 0.22
POLR2J3-216ENST00000511773 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
POLR2J3-216ENST00000511773 MDM2Q00987 491 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-216ENST00000511773 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
POLR2J3-216ENST00000511773 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-216ENST00000511773 PA2G4Q9UQ80 394 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-216ENST00000511773 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-216ENST00000511773 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-216ENST00000511773 MECOMQ03112 1051 aa16.41■□□□□ 0.22
POLR2J3-216ENST00000511773 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-216ENST00000511773 TBC1D12O60347 775 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 RHBDL3P58872 404 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 TIMM10P62072 90 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 MTMR2Q13614 643 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 FAM9BQ8IZU0 186 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 FAM161BQ96MY7 647 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
POLR2J3-216ENST00000511773 GPR75-ASB3A0A0A6YYF3 556 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 USP17L5A8MUK1 530 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 CAP2P40123 477 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 LRRC26Q2I0M4 334 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 ZNF384Q8TF68 577 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 MORF4L1Q9UBU8 362 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 DNAH12Q6ZR08 3092 aa16.39■□□□□ 0.21
POLR2J3-216ENST00000511773 CCND3P30281 292 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 CACNB2Q08289 660 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 SOCS4Q8WXH5 440 aa16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 NUDT12Q9BQG2 462 aa16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 PDS5AQ29RF7 1337 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-216ENST00000511773 COL6A1P12109 1028 aa16.37■□□□□ 0.21
POLR2J3-216ENST00000511773 SH3D19Q5HYK7 790 aa16.37■□□□□ 0.21
POLR2J3-216ENST00000511773 PI16Q6UXB8 463 aa16.37■□□□□ 0.21
POLR2J3-216ENST00000511773 GPRC5AQ8NFJ5 357 aa16.37■□□□□ 0.21
POLR2J3-216ENST00000511773 GUCD1Q96NT3 240 aa16.37■□□□□ 0.21
POLR2J3-216ENST00000511773 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-216ENST00000511773 VCANP13611 3396 aa16.37■□□□□ 0.21
POLR2J3-216ENST00000511773 COL2A1P02458 1487 aaPredicted RBP16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 FRMPD3Q5JV73 1810 aa16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 HERVK_113P62684 666 aa16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 CCL14Q16627 93 aa16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 XAGE2Q96GT9 111 aa16.36■□□□□ 0.21
POLR2J3-216ENST00000511773 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 ANP32CO43423 234 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 GSTO1P78417 241 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 MVPQ14764 893 aaKnown RBP16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 LHX8Q68G74 356 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 SMC4Q9NTJ3 1288 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 ZNF521Q96K83 1311 aa16.35■□□□□ 0.21
POLR2J3-216ENST00000511773 EYSQ5T1H1 3165 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 MAST2Q6P0Q8 1798 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 ZBTB22O15209 634 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 LDHCP07864 332 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 MAPK4P31152 587 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 RGS2P41220 211 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 BACE1P56817 501 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 TFCP2Q12800 502 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 SHROOM1Q2M3G4 852 aaPredicted RBP16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 NSUN4Q96CB9 384 aaKnown RBP16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 NEUROD6Q96NK8 337 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms