RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 HDAC9Q9UKV0 1011 aa10.75□□□□□ -0.69
PDPN-209ENST00000510906 TNNQ9UQP3 1299 aa10.75□□□□□ -0.69
PDPN-209ENST00000510906 PCDHAC2Q9Y5I4 1007 aa10.75□□□□□ -0.69
PDPN-209ENST00000510906 KIF16BQ96L93 1317 aa10.75□□□□□ -0.69
PDPN-209ENST00000510906 BCAR3O75815 825 aa10.74□□□□□ -0.69
PDPN-209ENST00000510906 F12P00748 615 aaPredicted RBP10.74□□□□□ -0.69
PDPN-209ENST00000510906 MAP2K2P36507 400 aa10.74□□□□□ -0.69
PDPN-209ENST00000510906 CTCFP49711 727 aaPredicted RBP10.74□□□□□ -0.69
PDPN-209ENST00000510906 PTPN12Q05209 780 aaKnown RBP10.74□□□□□ -0.69
PDPN-209ENST00000510906 THSD4Q6ZMP0 1018 aa10.74□□□□□ -0.69
PDPN-209ENST00000510906 TDRD7Q8NHU6 1098 aaKnown RBP10.74□□□□□ -0.69
PDPN-209ENST00000510906 ARHGAP45Q92619 1136 aa10.74□□□□□ -0.69
PDPN-209ENST00000510906 ZBED3Q96IU2 234 aaPredicted RBP10.74□□□□□ -0.69
PDPN-209ENST00000510906 ZIC5Q96T25 663 aa10.74□□□□□ -0.69
PDPN-209ENST00000510906 IQSEC3Q9UPP2 1182 aaPredicted RBP10.74□□□□□ -0.69
PDPN-209ENST00000510906 LRRFIP2Q9Y608 721 aaKnown RBP10.74□□□□□ -0.69
PDPN-209ENST00000510906 FAM205AQ6ZU69 1335 aa10.74□□□□□ -0.69
PDPN-209ENST00000510906 A0A1B0GUL6 1792 aa10.74□□□□□ -0.69
PDPN-209ENST00000510906 THSD7BQ9C0I4 1608 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 EYA2O00167 538 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 PDE8BO95263 885 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 HSPA8P11142 646 aaKnown RBP10.73□□□□□ -0.69
PDPN-209ENST00000510906 JUNDP17535 347 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 MMP14P50281 582 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 LBX1P52954 281 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 FKBP1AP62942 108 aaKnown RBP10.73□□□□□ -0.69
PDPN-209ENST00000510906 VAC14Q08AM6 782 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 DLGAP5Q15398 846 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 PTPRNQ16849 979 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 MSS51Q4VC12 460 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 RGMBQ6NW40 437 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 MOB2Q70IA6 237 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 FBXO33Q7Z6M2 555 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 FRAT1Q92837 279 aaPredicted RBP10.73□□□□□ -0.69
PDPN-209ENST00000510906 ALG2Q9H553 416 aa10.73□□□□□ -0.69
PDPN-209ENST00000510906 FAM155AB1AL88 458 aaPredicted RBP10.72□□□□□ -0.69
PDPN-209ENST00000510906 TRIM27P14373 513 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 FGFR2P21802 821 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 ZNF157P51786 506 aaPredicted RBP10.72□□□□□ -0.69
PDPN-209ENST00000510906 CHAF1AQ13111 956 aaPredicted RBP10.72□□□□□ -0.69
PDPN-209ENST00000510906 NOGQ13253 232 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 CFAP100Q494V2 611 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 MFSD14BQ5SR56 506 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 INTS3Q68E01 1043 aaKnown RBP10.72□□□□□ -0.69
PDPN-209ENST00000510906 ATG9AQ7Z3C6 839 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 SIL1Q9H173 461 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 PRDM10Q9NQV6 1147 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 AOX1Q06278 1338 aa10.72□□□□□ -0.69
PDPN-209ENST00000510906 CLRN2A0PK11 232 aa10.71□□□□□ -0.69
PDPN-209ENST00000510906 IPO8O15397 1037 aaKnown RBP10.71□□□□□ -0.69
PDPN-209ENST00000510906 POLR2AP24928 1970 aaKnown RBP10.71□□□□□ -0.69
PDPN-209ENST00000510906 PUM3Q15397 648 aaKnown RBP10.71□□□□□ -0.69
PDPN-209ENST00000510906 GRIK5Q16478 980 aa10.71□□□□□ -0.69
PDPN-209ENST00000510906 CAVIN4Q5BKX8 364 aa10.71□□□□□ -0.69
PDPN-209ENST00000510906 ATF7IPQ6VMQ6 1270 aa10.71□□□□□ -0.69
PDPN-209ENST00000510906 NYAP1Q6ZVC0 841 aa10.71□□□□□ -0.69
PDPN-209ENST00000510906 VPS37DQ86XT2 251 aa10.71□□□□□ -0.69
PDPN-209ENST00000510906 APOBEC3FQ8IUX4 373 aaKnown RBP10.71□□□□□ -0.69
PDPN-209ENST00000510906 PRMT6Q96LA8 375 aaPredicted RBP10.71□□□□□ -0.69
PDPN-209ENST00000510906 PA2G4Q9UQ80 394 aaKnown RBP10.71□□□□□ -0.69
PDPN-209ENST00000510906 UBE2Q2LH0YL09 131 aa10.7□□□□□ -0.7
PDPN-209ENST00000510906 IFIT1P09914 478 aaKnown RBP10.7□□□□□ -0.7
PDPN-209ENST00000510906 SOX11P35716 441 aa10.7□□□□□ -0.7
PDPN-209ENST00000510906 RBM5P52756 815 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDPN-209ENST00000510906 FKBP1BP68106 108 aa10.7□□□□□ -0.7
PDPN-209ENST00000510906 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
PDPN-209ENST00000510906 RASAL3Q86YV0 1011 aa10.7□□□□□ -0.7
PDPN-209ENST00000510906 TTF2Q9UNY4 1162 aaKnown RBP10.7□□□□□ -0.7
PDPN-209ENST00000510906 FRAT2O75474 233 aaPredicted RBP10.69□□□□□ -0.7
PDPN-209ENST00000510906 CIAO1O76071 339 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
PDPN-209ENST00000510906 GNAI3P08754 354 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 SLC5A1P13866 664 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 NF2P35240 595 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 PRKG1Q13976 671 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 FAM160A2Q8N612 972 aaPredicted RBP10.69□□□□□ -0.7
PDPN-209ENST00000510906 PNMA1Q8ND90 353 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 LPIN2Q92539 896 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 DEFB129Q9H1M3 183 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 VEZTQ9HBM0 779 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 COPRSQ9NQ92 184 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 HDAC5Q9UQL6 1122 aa10.69□□□□□ -0.7
PDPN-209ENST00000510906 PAPPA2Q9BXP8 1791 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 ZBED9Q6R2W3 1325 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 MYO1BO43795 1136 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 IL15P40933 162 aaPredicted RBP10.68□□□□□ -0.7
PDPN-209ENST00000510906 CRKP46108 304 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 MMP16P51512 607 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 ATP2B3Q16720 1220 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 TMEM57Q8N5G2 664 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 CEP126Q9P2H0 1117 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 FKBPLQ9UIM3 349 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 FZD1Q9UP38 647 aa10.68□□□□□ -0.7
PDPN-209ENST00000510906 SRGAP3O43295 1099 aa10.67□□□□□ -0.7
PDPN-209ENST00000510906 CA12O43570 354 aa10.67□□□□□ -0.7
PDPN-209ENST00000510906 MTX1Q13505 466 aa10.67□□□□□ -0.7
PDPN-209ENST00000510906 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
PDPN-209ENST00000510906 TBC1D22AQ8WUA7 517 aa10.67□□□□□ -0.7
PDPN-209ENST00000510906 SPSB2Q99619 263 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms