RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	NUDT12	Q9BQG2	462 aa		13.73	□□□□□ -0.21
PTCD2-208	ENST00000510676	MBIP	Q9NS73	344 aa		13.73	□□□□□ -0.21
PTCD2-208	ENST00000510676	DAGLA	Q9Y4D2	1042 aa		13.73	□□□□□ -0.21
PTCD2-208	ENST00000510676	ZDBF2	Q9HCK1	2354 aa		13.73	□□□□□ -0.21
PTCD2-208	ENST00000510676	TRIM43B	A6NCK2	446 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	EPHB4	P54760	987 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	NFIA	Q12857	509 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	ADGRE1	Q14246	886 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	C1orf53	Q5VUE5	145 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	FAM198A	Q9UFP1	575 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	ATP11B	Q9Y2G3	1177 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	RLF	Q13129	1914 aa		13.72	□□□□□ -0.21
PTCD2-208	ENST00000510676	MSC	O60682	206 aa		13.71	□□□□□ -0.21
PTCD2-208	ENST00000510676	CTNND1	O60716	968 aa	Known RBP	13.71	□□□□□ -0.21
PTCD2-208	ENST00000510676	ZNF853	P0CG23	659 aa		13.71	□□□□□ -0.21
PTCD2-208	ENST00000510676	TCP10	Q12799	353 aa		13.71	□□□□□ -0.21
PTCD2-208	ENST00000510676	SLC39A5	Q6ZMH5	540 aa		13.71	□□□□□ -0.21
PTCD2-208	ENST00000510676	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.71	□□□□□ -0.21
PTCD2-208	ENST00000510676	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.71	□□□□□ -0.21
PTCD2-208	ENST00000510676	TCF20	Q9UGU0	1960 aa	Known RBP	13.71	□□□□□ -0.22
PTCD2-208	ENST00000510676	LOC285556	D6RIA3	1793 aa		13.71	□□□□□ -0.22
PTCD2-208	ENST00000510676	SPTBN4	Q9H254	2564 aa		13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	FOXO4	P98177	505 aa		13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	CCL14	Q16627	93 aa		13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	MORN1	Q5T089	497 aa		13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	CDC42EP5	Q6NZY7	148 aa		13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	SH3RF1	Q7Z6J0	888 aa		13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	CHMP4A	Q9BY43	222 aa		13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	DDX20	Q9UHI6	824 aa	Known RBP	13.7	□□□□□ -0.22
PTCD2-208	ENST00000510676	ITGB8	P26012	769 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	RGS2	P41220	211 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	AAK1	Q2M2I8	961 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	CCDC30	Q5VVM6	783 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	LDHAL6A	Q6ZMR3	332 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	APBA2	Q99767	749 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	PRDM12	Q9H4Q4	367 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	C5orf42	Q9H799	3197 aa		13.69	□□□□□ -0.22
PTCD2-208	ENST00000510676	UTY	O14607	1347 aa		13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	DOCK1	Q14185	1865 aa		13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	PLIN1	O60240	522 aa		13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	MAPK4	P31152	587 aa		13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	CHAF1A	Q13111	956 aa	Predicted RBP	13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	TRIM60	Q495X7	471 aa		13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	ZFPM1	Q8IX07	1006 aa		13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.68	□□□□□ -0.22
PTCD2-208	ENST00000510676	TFF2	Q03403	129 aa		13.67	□□□□□ -0.22
PTCD2-208	ENST00000510676	CCDC85B	Q15834	202 aa	Predicted RBP	13.67	□□□□□ -0.22
PTCD2-208	ENST00000510676	CNNM1	Q9NRU3	951 aa		13.67	□□□□□ -0.22
PTCD2-208	ENST00000510676	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.67	□□□□□ -0.22
PTCD2-208	ENST00000510676	ELL2	O00472	640 aa	Predicted RBP	13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	KIAA0355	O15063	1070 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	IGHA2	P01877	340 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	KCNQ1	P51787	676 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	NEUROD2	Q15784	382 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	GPRC5A	Q8NFJ5	357 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	ZNF594	Q96JF6	807 aa	Predicted RBP	13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	PBX4	Q9BYU1	374 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	MYH16	Q9H6N6	1097 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	TXNRD2	Q9NNW7	524 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	LRRFIP2	Q9Y608	721 aa	Known RBP	13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	TACC3	Q9Y6A5	838 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	RFX7	Q2KHR2	1363 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	DOCK2	Q92608	1830 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	TRIO	O75962	3097 aa		13.66	□□□□□ -0.22
PTCD2-208	ENST00000510676	SMIM22	K7EJ46	135 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	ERC2	O15083	957 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	ENTPD3	O75355	529 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	NHLH1	Q02575	133 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	SH3D19	Q5HYK7	790 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	RASIP1	Q5U651	963 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	MFSD14C	Q5VZR4	134 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	SH3BP5L	Q7L8J4	393 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	CCDC84	Q86UT8	332 aa	Predicted RBP	13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	VPS37D	Q86XT2	251 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	C8orf58	Q8NAV2	365 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	ARRDC4	Q8NCT1	418 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	ZNF280C	Q8ND82	737 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	IDI2	Q9BXS1	227 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	TBC1D2	Q9BYX2	928 aa		13.65	□□□□□ -0.22
PTCD2-208	ENST00000510676	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	FAM86C2P	A6NEL3	165 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	PRR33	A8MZF0	331 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	PI4K2B	G5E9Z4	385 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	HOXA7	P31268	230 aa	Predicted RBP	13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	PBX2	P40425	430 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	HMGCS2	P54868	508 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	TLE2	Q04725	743 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	FPGS	Q05932	587 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	SPP2	Q13103	211 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	CCDC57	Q2TAC2	916 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	GPR142	Q7Z601	462 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	LINS1	Q8NG48	757 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	IFT57	Q9NWB7	429 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	FLRT1	Q9NZU1	646 aa		13.64	□□□□□ -0.23
PTCD2-208	ENST00000510676	FRAT2	O75474	233 aa	Predicted RBP	13.63	□□□□□ -0.23
PTCD2-208	ENST00000510676	HOXC6	P09630	235 aa		13.63	□□□□□ -0.23

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