RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 C19orf44Q9H6X5 657 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 SBNO1A3KN83 1393 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 PXDNLA1KZ92 1463 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 CEMIPQ8WUJ3 1361 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 A0A0U1RQJ8 604 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 PEX19P40855 299 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 E2F5Q15329 346 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 OLFM4Q6UX06 510 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 DRAXINQ8NBI3 349 aaPredicted RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 ATRIPQ8WXE1 791 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 EPN3Q9H201 632 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 PDCLQ13371 301 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 SF3A1Q15459 793 aaKnown RBP11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 NCAPH2Q6IBW4 605 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 KLHL23Q8NBE8 558 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 LINC00301Q8NCQ3 95 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 EVI5LQ96CN4 794 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 CCDC114Q96M63 670 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 MYH8P13535 1937 aa11.32□□□□□ -0.6
PDGFRA-207ENST00000509092 PPP1R12BO60237 982 aaPredicted RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 YEATS4O95619 227 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 RPSAP08865 295 aaKnown RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 ATP5JP18859 108 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 FOSBP53539 338 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 PSMD2Q13200 908 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 KCNB1Q14721 858 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 STK38Q15208 465 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 CCNI2Q6ZMN8 369 aaPredicted RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 ZNF473Q8WTR7 871 aaKnown RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 CDC5LQ99459 802 aaKnown RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 JCADQ9P266 1359 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 LAMA4Q16363 1823 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 KRT32Q14532 448 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 TBC1D25Q3MII6 688 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 RPGRIP1Q96KN7 1286 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
PDGFRA-207ENST00000509092 NMIQ13287 307 aaPredicted RBP11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 NBPF14Q5TI25 921 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 CAPRIN2Q6IMN6 1127 aaKnown RBP11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 C6orf89Q6UWU4 347 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 UBE3BQ7Z3V4 1068 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 PPP1R42Q7Z4L9 355 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 AENQ8WTP8 325 aaKnown RBP11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 SLC39A2Q9NP94 309 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 CEP170BQ9Y4F5 1589 aaPredicted RBP11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 NBPF7P0C2Y1 421 aaPredicted RBP11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 PFKFB1P16118 471 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 FBLN1P23142 703 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 LSP1P33241 339 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 CCDC121Q6ZUS5 278 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 FAM227BQ96M60 508 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
PDGFRA-207ENST00000509092 PTPDC1A2A3K4 754 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 SRRM3A6NNA2 597 aaPredicted RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 ENO4A6NNW6 628 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 SPTLC2O15270 562 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 CMA1P23946 247 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 IFT88Q13099 833 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 Q6ZUG5 572 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 RPUSD2Q8IZ73 545 aaKnown RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 C3orf20Q8ND61 904 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 RASSF8Q8NHQ8 419 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 ECHDC1Q9NTX5 307 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 POLR3EQ9NVU0 708 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 HOOK1Q9UJC3 728 aaKnown RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 MED23Q9ULK4 1368 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 CRB1P82279 1406 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 AHCYL1O43865 530 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 ZNF18P17022 549 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 CKAP4Q07065 602 aaKnown RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 FLIIQ13045 1269 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 SNX1Q13596 522 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 TTMPQ5BVD1 217 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 MIS18BP1Q6P0N0 1132 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 KDM7AQ6ZMT4 941 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 BZW1Q7L1Q6 419 aaKnown RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 TAX1BP1Q86VP1 789 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 GSPT2Q8IYD1 628 aaKnown RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 CCDC47Q96A33 483 aaKnown RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 USP44Q9H0E7 712 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 HAUS2Q9NVX0 235 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms