RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 HLA-DOAP06340 250 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 PCP11498 1178 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 PDE4BQ07343 736 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 ASTN2O75129 1339 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 DDTLA6NHG4 134 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 FGRP09769 529 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 SH3BP5LQ7L8J4 393 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 SNX21Q969T3 373 aa17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 ADARB2Q9NS39 739 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNCAIP-211ENST00000509023 COL2A1P02458 1487 aaPredicted RBP17.52■□□□□ 0.4
SNCAIP-211ENST00000509023 KDM4AO75164 1064 aa17.52■□□□□ 0.4
SNCAIP-211ENST00000509023 MCM5P33992 734 aa17.52■□□□□ 0.4
SNCAIP-211ENST00000509023 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-211ENST00000509023 SLC44A5Q8NCS7 719 aa17.52■□□□□ 0.4
SNCAIP-211ENST00000509023 FAM151AQ8WW52 585 aa17.52■□□□□ 0.4
SNCAIP-211ENST00000509023 HACL1Q9UJ83 578 aa17.52■□□□□ 0.4
SNCAIP-211ENST00000509023 ATRNL1Q5VV63 1379 aa17.52■□□□□ 0.39
SNCAIP-211ENST00000509023 HIRAP54198 1017 aaPredicted RBP17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 AK2P54819 239 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 C16orf86Q6ZW13 317 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 FAM83AQ86UY5 434 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 HSCBQ8IWL3 235 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 LRRC2Q9BYS8 371 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 TBC1D2Q9BYX2 928 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 SCAF8Q9UPN6 1271 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 PRC1O43663 620 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 ORC4O43929 436 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 ANTXR2P58335 489 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 TNFAIP1Q13829 316 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 CYB5R4Q7L1T6 521 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 ESR2Q92731 530 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
SNCAIP-211ENST00000509023 TNNI2P48788 182 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 CDK8P49336 464 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 GABPAQ06546 454 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 BECN1Q14457 450 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 ANGEL2Q5VTE6 544 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 Q6ZUG5 572 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 NOL8Q76FK4 1167 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 TMEM39BQ9GZU3 492 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 EHD4Q9H223 541 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 ZSWIM5Q9P217 1185 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 SIPA1L1O43166 1804 aa17.5■□□□□ 0.39
SNCAIP-211ENST00000509023 RANBP6O60518 1105 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 CSRNP1Q96S65 589 aa17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 WDR19Q8NEZ3 1342 aa17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 FGD1P98174 961 aa17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 TOB2Q14106 344 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 RASA3Q14644 834 aa17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 LARP6Q9BRS8 491 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 ALDH8A1Q9H2A2 487 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
SNCAIP-211ENST00000509023 MCM2P49736 904 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 SWAP70Q9UH65 585 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 WDR90Q96KV7 1748 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 SCN4AP35499 1836 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 IQCA1LA6NCM1 817 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 K7ELQ4 463 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 SLURP2P0DP57 97 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 RASA1P20936 1047 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 EPHX2P34913 555 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 FAM47AQ5JRC9 791 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 APOBEC3FQ8IUX4 373 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 ZNF444Q8N0Y2 327 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 TRIM34Q9BYJ4 488 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 DNAJC18Q9H819 358 aa17.48■□□□□ 0.39
SNCAIP-211ENST00000509023 TSPY2A6NKD2 308 aa17.47■□□□□ 0.39
SNCAIP-211ENST00000509023 FOXP4Q8IVH2 680 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-211ENST00000509023 CDAN1Q8IWY9 1227 aa17.47■□□□□ 0.39
SNCAIP-211ENST00000509023 BRF1Q92994 677 aa17.47■□□□□ 0.39
SNCAIP-211ENST00000509023 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
SNCAIP-211ENST00000509023 FAM196BA6NMK8 535 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 NT5C2P49902 561 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 USP50Q70EL3 339 aaPredicted RBP17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 TMEM87BQ96K49 555 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 AGXT2Q9BYV1 514 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 PGAP2Q9UHJ9 254 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 POTECB2RU33 542 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 SHMT1P34896 483 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 TFAP4Q01664 338 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 FBXL16Q8N461 479 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 UBAC1Q9BSL1 405 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms