RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 TMED8Q6PL24 325 aaPredicted RBP22.02■■□□□ 1.12
CLDND1-220ENST00000508902 METTL16Q86W50 562 aaKnown RBP22.02■■□□□ 1.12
CLDND1-220ENST00000508902 ERO1BQ86YB8 467 aa22.02■■□□□ 1.12
CLDND1-220ENST00000508902 KBTBD3Q8NAB2 608 aa22.02■■□□□ 1.12
CLDND1-220ENST00000508902 PUS7LQ9H0K6 701 aaKnown RBP22.02■■□□□ 1.12
CLDND1-220ENST00000508902 ARMT1Q9H993 441 aa22.02■■□□□ 1.12
CLDND1-220ENST00000508902 MANSC4A6NHS7 340 aaPredicted RBP22.01■■□□□ 1.11
CLDND1-220ENST00000508902 SMIM22K7EJ46 135 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 CA12O43570 354 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 PRKAB2O43741 272 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 MOGSQ13724 837 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 B4GALNT3Q6L9W6 998 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 IFNL1Q8IU54 200 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 SDR42E1Q8WUS8 393 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 BEGAINQ9BUH8 593 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 RWDD1Q9H446 243 aaPredicted RBP22.01■■□□□ 1.11
CLDND1-220ENST00000508902 STAP2Q9UGK3 403 aa22.01■■□□□ 1.11
CLDND1-220ENST00000508902 MBD4O95243 580 aa22■■□□□ 1.11
CLDND1-220ENST00000508902 TBC1D8O95759 1140 aa22■■□□□ 1.11
CLDND1-220ENST00000508902 PPIL2Q13356 520 aa22■■□□□ 1.11
CLDND1-220ENST00000508902 UBE3CQ15386 1083 aa22■■□□□ 1.11
CLDND1-220ENST00000508902 REM2Q8IYK8 340 aaPredicted RBP22■■□□□ 1.11
CLDND1-220ENST00000508902 PDE1AP54750 535 aa21.99■■□□□ 1.11
CLDND1-220ENST00000508902 NUCB1Q02818 461 aa21.99■■□□□ 1.11
CLDND1-220ENST00000508902 SREBF2Q12772 1141 aa21.99■■□□□ 1.11
CLDND1-220ENST00000508902 SCYL3Q8IZE3 742 aa21.99■■□□□ 1.11
CLDND1-220ENST00000508902 OSBP2Q969R2 916 aa21.99■■□□□ 1.11
CLDND1-220ENST00000508902 GPATCH3Q96I76 525 aa21.99■■□□□ 1.11
CLDND1-220ENST00000508902 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.99■■□□□ 1.111e-6■■■□□ 18.4
CLDND1-220ENST00000508902 GLRX3O76003 335 aaKnown RBP21.98■■□□□ 1.11
CLDND1-220ENST00000508902 CYP2D6P10635 497 aa21.98■■□□□ 1.11
CLDND1-220ENST00000508902 PLCD1P51178 756 aa21.98■■□□□ 1.11
CLDND1-220ENST00000508902 PPATQ06203 517 aa21.98■■□□□ 1.11
CLDND1-220ENST00000508902 FAM43AQ8N2R8 423 aa21.98■■□□□ 1.11
CLDND1-220ENST00000508902 PI4KBQ9UBF8 816 aa21.98■■□□□ 1.11
CLDND1-220ENST00000508902 KCNH4Q9UQ05 1017 aa21.98■■□□□ 1.11
CLDND1-220ENST00000508902 LOC285556D6RIA3 1793 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 HTTP42858 3142 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 CCL15-CCL14A0A0B4J2E2 113 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 PTPRAP18433 802 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 USP5P45974 858 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 CCL15Q16663 113 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 CHD1LQ86WJ1 897 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 CFHR5Q9BXR6 569 aa21.97■■□□□ 1.11
CLDND1-220ENST00000508902 DHX36Q9H2U1 1008 aaKnown RBP21.97■■□□□ 1.11
CLDND1-220ENST00000508902 DCP1AQ9NPI6 582 aaPredicted RBP21.97■■□□□ 1.11
CLDND1-220ENST00000508902 ZSWIM8A7E2V4 1837 aa21.96■■□□□ 1.11
CLDND1-220ENST00000508902 M0R2C6 588 aa21.96■■□□□ 1.11
CLDND1-220ENST00000508902 CTNND1O60716 968 aaKnown RBP21.96■■□□□ 1.11
CLDND1-220ENST00000508902 PDE4AP27815 886 aa21.96■■□□□ 1.11
CLDND1-220ENST00000508902 CERS3Q8IU89 383 aa21.96■■□□□ 1.11
CLDND1-220ENST00000508902 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.96■■□□□ 1.11
CLDND1-220ENST00000508902 HERC5Q9UII4 1024 aaKnown RBP21.96■■□□□ 1.11
CLDND1-220ENST00000508902 CAP1Q01518 475 aa21.95■■□□□ 1.1
CLDND1-220ENST00000508902 GABPAQ06546 454 aa21.95■■□□□ 1.1
CLDND1-220ENST00000508902 PLEKHM2Q8IWE5 1019 aa21.95■■□□□ 1.1
CLDND1-220ENST00000508902 SEC62Q99442 399 aaKnown RBP21.95■■□□□ 1.1
CLDND1-220ENST00000508902 CRNKL1Q9BZJ0 848 aaKnown RBP21.95■■□□□ 1.1
CLDND1-220ENST00000508902 AFG3L2Q9Y4W6 797 aa21.95■■□□□ 1.1
CLDND1-220ENST00000508902 CYP2D7A0A087X1C5 515 aa21.94■■□□□ 1.1
CLDND1-220ENST00000508902 BTBD19C9JJ37 291 aa21.94■■□□□ 1.1
CLDND1-220ENST00000508902 ERC2O15083 957 aa21.94■■□□□ 1.1
CLDND1-220ENST00000508902 RNF113AO15541 343 aaKnown RBP21.94■■□□□ 1.1
CLDND1-220ENST00000508902 CAP2P40123 477 aa21.94■■□□□ 1.1
CLDND1-220ENST00000508902 GTF2A2P52657 109 aa21.94■■□□□ 1.1
CLDND1-220ENST00000508902 ZHX2Q9Y6X8 837 aa21.94■■□□□ 1.1
CLDND1-220ENST00000508902 MYH8P13535 1937 aa21.94■■□□□ 1.1
CLDND1-220ENST00000508902 GDF11O95390 407 aa21.93■■□□□ 1.1
CLDND1-220ENST00000508902 INHBEP58166 350 aa21.93■■□□□ 1.1
CLDND1-220ENST00000508902 CRHR2Q13324 411 aa21.93■■□□□ 1.1
CLDND1-220ENST00000508902 DGKZQ13574 1117 aa21.93■■□□□ 1.1
CLDND1-220ENST00000508902 APPBP2Q92624 585 aa21.93■■□□□ 1.1
CLDND1-220ENST00000508902 STRBPQ96SI9 672 aaKnown RBP21.93■■□□□ 1.1
CLDND1-220ENST00000508902 EHD4Q9H223 541 aa21.93■■□□□ 1.1
CLDND1-220ENST00000508902 SHMT1P34896 483 aa21.92■■□□□ 1.1
CLDND1-220ENST00000508902 SNAPC2Q13487 334 aa21.92■■□□□ 1.1
CLDND1-220ENST00000508902 GPAT2Q6NUI2 795 aa21.92■■□□□ 1.1
CLDND1-220ENST00000508902 FOXP4Q8IVH2 680 aaPredicted RBP21.92■■□□□ 1.1
CLDND1-220ENST00000508902 SLC44A5Q8NCS7 719 aa21.92■■□□□ 1.1
CLDND1-220ENST00000508902 EPB41L4AQ9HCS5 686 aaPredicted RBP21.92■■□□□ 1.1
CLDND1-220ENST00000508902 GPR25O00155 361 aa21.91■■□□□ 1.1
CLDND1-220ENST00000508902 FOXP2O15409 715 aa21.91■■□□□ 1.1
CLDND1-220ENST00000508902 ZSCAN25Q6NSZ9 544 aa21.91■■□□□ 1.1
CLDND1-220ENST00000508902 TATDN1Q6P1N9 297 aa21.91■■□□□ 1.1
CLDND1-220ENST00000508902 ZNF296Q8WUU4 475 aaPredicted RBP21.91■■□□□ 1.1
CLDND1-220ENST00000508902 MCM9Q9NXL9 1143 aa21.91■■□□□ 1.1
CLDND1-220ENST00000508902 ADGRA2Q96PE1 1338 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 A0A0G2JLL6 359 aaPredicted RBP21.9■■□□□ 1.1
CLDND1-220ENST00000508902 GSG1L2A8MUP6 293 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 HLA-DOAP06340 250 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 CETPP11597 493 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 ZMYM1Q5SVZ6 1142 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 PRRT2Q7Z6L0 340 aaPredicted RBP21.9■■□□□ 1.1
CLDND1-220ENST00000508902 DYNLL2Q96FJ2 89 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 FSD1Q9BTV5 496 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 OSBPL3Q9H4L5 887 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 PICK1Q9NRD5 415 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 SERPINB13Q9UIV8 391 aa21.9■■□□□ 1.1
CLDND1-220ENST00000508902 CXCL11O14625 94 aa21.89■■□□□ 1.09
CLDND1-220ENST00000508902 GPAA1O43292 621 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms