RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC02171-201ENST00000508619 FOCADQ5VW36 1801 aa16.47■□□□□ 0.23
LINC02171-201ENST00000508619 SOX10P56693 466 aa16.46■□□□□ 0.23
LINC02171-201ENST00000508619 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
LINC02171-201ENST00000508619 KIF22Q14807 665 aa16.46■□□□□ 0.23
LINC02171-201ENST00000508619 TTF1Q15361 905 aaPredicted RBP16.46■□□□□ 0.23
LINC02171-201ENST00000508619 GPAT2Q6NUI2 795 aa16.46■□□□□ 0.23
LINC02171-201ENST00000508619 ADGRA1Q86SQ6 560 aa16.46■□□□□ 0.23
LINC02171-201ENST00000508619 PTPRFP10586 1907 aa16.46■□□□□ 0.23
LINC02171-201ENST00000508619 FLT1P17948 1338 aa16.45■□□□□ 0.22
LINC02171-201ENST00000508619 CENPFP49454 3210 aa16.45■□□□□ 0.22
LINC02171-201ENST00000508619 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
LINC02171-201ENST00000508619 CAP2P40123 477 aa16.45■□□□□ 0.22
LINC02171-201ENST00000508619 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
LINC02171-201ENST00000508619 TNRC18O15417 2968 aaPredicted RBP16.44■□□□□ 0.22
LINC02171-201ENST00000508619 MYO5AQ9Y4I1 1855 aaKnown RBP16.44■□□□□ 0.22
LINC02171-201ENST00000508619 IDH1O75874 414 aaKnown RBP16.44■□□□□ 0.22
LINC02171-201ENST00000508619 CYP7A1P22680 504 aa16.44■□□□□ 0.22
LINC02171-201ENST00000508619 CAP1Q01518 475 aa16.44■□□□□ 0.22
LINC02171-201ENST00000508619 PROCA1Q8NCQ7 364 aaPredicted RBP16.44■□□□□ 0.22
LINC02171-201ENST00000508619 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
LINC02171-201ENST00000508619 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
LINC02171-201ENST00000508619 BCRP11274 1271 aa16.43■□□□□ 0.22
LINC02171-201ENST00000508619 TGFBRAP1Q8WUH2 860 aa16.43■□□□□ 0.22
LINC02171-201ENST00000508619 AGTPBP1Q9UPW5 1226 aa16.43■□□□□ 0.22
LINC02171-201ENST00000508619 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 RBBP6Q7Z6E9 1792 aaKnown RBP16.42■□□□□ 0.22
LINC02171-201ENST00000508619 HLA-DOAP06340 250 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 ASNSP08243 561 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
LINC02171-201ENST00000508619 SH3D19Q5HYK7 790 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 MAPKAPK5Q8IW41 473 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 ZNF280CQ8ND82 737 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 ZNF333Q96JL9 665 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 PNMA3Q9UL41 463 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
LINC02171-201ENST00000508619 USP17L5A8MUK1 530 aa16.41■□□□□ 0.22
LINC02171-201ENST00000508619 SLURP2P0DP57 97 aa16.41■□□□□ 0.22
LINC02171-201ENST00000508619 HOXD10P28358 340 aa16.41■□□□□ 0.22
LINC02171-201ENST00000508619 EHD4Q9H223 541 aa16.41■□□□□ 0.22
LINC02171-201ENST00000508619 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
LINC02171-201ENST00000508619 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 PABPC4Q13310 644 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC02171-201ENST00000508619 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 GADL1Q6ZQY3 521 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 RIOK1Q9BRS2 568 aaKnown RBP16.4■□□□□ 0.22
LINC02171-201ENST00000508619 DNAJC18Q9H819 358 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 ATAD5Q96QE3 1844 aa16.4■□□□□ 0.22
LINC02171-201ENST00000508619 ATP5JP18859 108 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 PSMC4P43686 418 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 DYNLL1P63167 89 aaKnown RBP16.39■□□□□ 0.21
LINC02171-201ENST00000508619 SPP2Q13103 211 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 RRP1BQ14684 758 aaKnown RBP16.39■□□□□ 0.21
LINC02171-201ENST00000508619 SLC9C1Q4G0N8 1177 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 TTC6Q86TZ1 520 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 TRIM47Q96LD4 638 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 TRIM34Q9BYJ4 488 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 ARHGAP39Q9C0H5 1083 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 SRRDQ9UH36 339 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
LINC02171-201ENST00000508619 CYP2C8P10632 490 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 PDE6AP16499 860 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 FCGRTP55899 365 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 TATDN1Q6P1N9 297 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 CRACR2BQ8N4Y2 399 aaPredicted RBP16.38■□□□□ 0.21
LINC02171-201ENST00000508619 MIGA1Q8NAN2 632 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 NDUFB9Q9Y6M9 179 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 BRCA2P51587 3418 aa16.38■□□□□ 0.21
LINC02171-201ENST00000508619 MYH1P12882 1939 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 C19orf81C9J6K1 198 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 CTGFP29279 349 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 USP5P45974 858 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 GCLCP48506 637 aaPredicted RBP16.37■□□□□ 0.21
LINC02171-201ENST00000508619 BACE1P56817 501 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 FAM110CQ1W6H9 321 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
LINC02171-201ENST00000508619 HAUS7Q99871 368 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.37■□□□□ 0.21
LINC02171-201ENST00000508619 SERPINB13Q9UIV8 391 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 ZBTB21Q9ULJ3 1066 aa16.37■□□□□ 0.21
LINC02171-201ENST00000508619 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
LINC02171-201ENST00000508619 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
LINC02171-201ENST00000508619 MAGEB6P1A0A0J9YX57 407 aa16.36■□□□□ 0.21
LINC02171-201ENST00000508619 TCRBV5S4A2TA0A5A2 114 aa16.36■□□□□ 0.21
LINC02171-201ENST00000508619 APBB1O00213 710 aa16.36■□□□□ 0.21
LINC02171-201ENST00000508619 GOLIM4O00461 696 aa16.36■□□□□ 0.21
LINC02171-201ENST00000508619 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
LINC02171-201ENST00000508619 OSBPP22059 807 aa16.36■□□□□ 0.21
LINC02171-201ENST00000508619 HOXA7P31268 230 aaPredicted RBP16.36■□□□□ 0.21
LINC02171-201ENST00000508619 CCDC84Q86UT8 332 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms