RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 IFNL2Q8IZJ0 200 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 USHBP1Q8N6Y0 703 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 ELOA3Q8NG57 546 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 EDEM1Q92611 657 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 RUNDC1Q96C34 613 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 PLEKHF1Q96S99 279 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 MEGF6O75095 1541 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 ICMTO60725 284 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 MMP20O60882 483 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 ADH7P40394 386 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 MFAP1P55081 439 aaKnown RBP7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 DNM1Q05193 864 aaKnown RBP7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 LMOD3Q0VAK6 560 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 CCDC184Q52MB2 194 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 AKAP4Q5JQC9 854 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 C1orf141Q5JVX7 400 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 HFE2Q6ZVN8 426 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 KRT27Q7Z3Y8 459 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 SUV39H2Q9H5I1 410 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 DNAJB12Q9NXW2 375 aaKnown RBP7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 LRRC37A3O60309 1634 aa7.19□□□□□ -1.26
HMGB1P44-201ENST00000508597 RGS12O14924 1447 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 ALBP02768 609 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 PDGFAP04085 211 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 RARAP10276 462 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 EPB42P16452 691 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 AMPD1P23109 780 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 MARSP56192 900 aaKnown RBP7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 COL13A1Q5TAT6 717 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 ZNF530Q6P9A1 599 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 FAM196AQ6ZSG2 479 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 PIK3R5Q8WYR1 880 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 PNMA5Q96PV4 448 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 UBE2OQ9C0C9 1292 aaKnown RBP7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 ENAMQ9NRM1 1142 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 POLIQ9UNA4 740 aa7.18□□□□□ -1.26
HMGB1P44-201ENST00000508597 BRWD3Q6RI45 1802 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 FAM181BA6NEQ2 426 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 GNAT3A8MTJ3 354 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 ERVV-2B6SEH9 535 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 MAP3K6O95382 1288 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 CYP2E1P05181 493 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 PHKG2P15735 406 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 HMGB2P26583 209 aaKnown RBP7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 DGKGP49619 791 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 ARHGAP4P98171 946 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 NFE2L2Q16236 605 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 CCDC27Q2M243 656 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 MTHFSDQ2M296 383 aaKnown RBP7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 C20orf204Q6ZNR8 217 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 DHX32Q7L7V1 743 aaKnown RBP7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 FAM9BQ8IZU0 186 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 MARCH10Q8NA82 808 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 RTF1Q92541 710 aaKnown RBP7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 DCAF5Q96JK2 942 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 TMEM63CQ9P1W3 806 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 SLC6A14Q9UN76 642 aa7.17□□□□□ -1.26
HMGB1P44-201ENST00000508597 SHANK3Q9BYB0 1731 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 H3BRB1 525 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 J3QW42 95 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 CYP27B1O15528 508 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 IRS1P35568 1242 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 TMPOP42166 694 aaKnown RBP7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 SF3B2Q13435 895 aaKnown RBP7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 MICALL1Q8N3F8 863 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 DDX54Q8TDD1 881 aaKnown RBP7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 NUDT8Q8WV74 236 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 PHACTR3Q96KR7 559 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 TUT1Q9H6E5 874 aaKnown RBP7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 C11orf16Q9NQ32 467 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 TLR7Q9NYK1 1049 aaKnown RBP7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 CNTN3Q9P232 1028 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 MAP3K5Q99683 1374 aa7.16□□□□□ -1.26
HMGB1P44-201ENST00000508597 DLG5Q8TDM6 1919 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 FAM13AO94988 1023 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 CPB1P15086 417 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 COL8A1P27658 744 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 RIPK4P57078 832 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 CALD1Q05682 793 aaKnown RBP7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 TRPM4Q8TD43 1214 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 TRIM11Q96F44 468 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 BABAM1Q9NWV8 329 aa7.15□□□□□ -1.26
HMGB1P44-201ENST00000508597 SCN11AQ9UI33 1791 aa7.15□□□□□ -1.27
HMGB1P44-201ENST00000508597 VIRMAQ69YN4 1812 aaKnown RBP7.15□□□□□ -1.27
HMGB1P44-201ENST00000508597 SBF2Q86WG5 1849 aa7.15□□□□□ -1.27
HMGB1P44-201ENST00000508597 M0R082 166 aa7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 APAF1O14727 1248 aa7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 RNMTO43148 476 aaKnown RBP7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 MZF1P28698 734 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 KCNMA1Q12791 1236 aa7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 AAMPQ13685 434 aa7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 CCDC146Q8IYE0 955 aa7.14□□□□□ -1.27
HMGB1P44-201ENST00000508597 RGS22Q8NE09 1264 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms