RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 GADL1Q6ZQY3 521 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
PTPN13-207ENST00000508063 TMEM106CQ9BVX2 250 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
PTPN13-207ENST00000508063 AATFQ9NY61 560 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN13-207ENST00000508063 PI4KBQ9UBF8 816 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 CPA4Q9UI42 421 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 DBNLQ9UJU6 430 aaKnown RBP13.54□□□□□ -0.24
PTPN13-207ENST00000508063 DDX19BQ9UMR2 479 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 HMMRO75330 724 aa13.53□□□□□ -0.24
PTPN13-207ENST00000508063 CAP1Q01518 475 aa13.53□□□□□ -0.24
PTPN13-207ENST00000508063 GPAT2Q6NUI2 795 aa13.53□□□□□ -0.24
PTPN13-207ENST00000508063 RPAP2Q8IXW5 612 aaPredicted RBP13.53□□□□□ -0.24
PTPN13-207ENST00000508063 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
PTPN13-207ENST00000508063 TRIM34Q9BYJ4 488 aa13.53□□□□□ -0.24
PTPN13-207ENST00000508063 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
PTPN13-207ENST00000508063 RBBP6Q7Z6E9 1792 aaKnown RBP13.53□□□□□ -0.24
PTPN13-207ENST00000508063 FMNL1O95466 1100 aaPredicted RBP13.52□□□□□ -0.25
PTPN13-207ENST00000508063 PSMC4P43686 418 aa13.52□□□□□ -0.25
PTPN13-207ENST00000508063 AACSQ86V21 672 aa13.52□□□□□ -0.25
PTPN13-207ENST00000508063 ZNF333Q96JL9 665 aa13.52□□□□□ -0.25
PTPN13-207ENST00000508063 AS3MTQ9HBK9 375 aa13.52□□□□□ -0.25
PTPN13-207ENST00000508063 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
PTPN13-207ENST00000508063 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
PTPN13-207ENST00000508063 ADGRA2Q96PE1 1338 aa13.52□□□□□ -0.25
PTPN13-207ENST00000508063 HTTP42858 3142 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 USP17L5A8MUK1 530 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
PTPN13-207ENST00000508063 CYP7A1P22680 504 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 CAP2P40123 477 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 FCGRTP55899 365 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 MAP3K12Q12852 859 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN13-207ENST00000508063 PRPF38BQ5VTL8 546 aaKnown RBP13.51□□□□□ -0.25
PTPN13-207ENST00000508063 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-207ENST00000508063 CLASRPQ8N2M8 674 aaKnown RBP13.51□□□□□ -0.25
PTPN13-207ENST00000508063 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-207ENST00000508063 ZNF280CQ8ND82 737 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 TGFBRAP1Q8WUH2 860 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 KIF1BPQ96EK5 621 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 ARHGAP39Q9C0H5 1083 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 PIH1D3Q9NQM4 214 aaKnown RBP13.51□□□□□ -0.25
PTPN13-207ENST00000508063 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 AGTPBP1Q9UPW5 1226 aa13.51□□□□□ -0.25
PTPN13-207ENST00000508063 PHIPQ8WWQ0 1821 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 FLT1P17948 1338 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 FAM196BA6NMK8 535 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 SLURP2P0DP57 97 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 CYP2C8P10632 490 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 BCRP11274 1271 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
PTPN13-207ENST00000508063 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 MAPKAPK5Q8IW41 473 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 CRACR2BQ8N4Y2 399 aaPredicted RBP13.5□□□□□ -0.25
PTPN13-207ENST00000508063 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 RAET1EQ8TD07 263 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 SMCR8Q8TEV9 937 aaPredicted RBP13.5□□□□□ -0.25
PTPN13-207ENST00000508063 TRIM47Q96LD4 638 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 SRRDQ9UH36 339 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 COG6Q9Y2V7 657 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 PTPRFP10586 1907 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 FOCADQ5VW36 1801 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 ATAD5Q96QE3 1844 aa13.5□□□□□ -0.25
PTPN13-207ENST00000508063 MYO5AQ9Y4I1 1855 aaKnown RBP13.49□□□□□ -0.25
PTPN13-207ENST00000508063 MYPNQ86TC9 1320 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 RAB11FIP3O75154 756 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 ASNSP08243 561 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 OSBPP22059 807 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 SPP2Q13103 211 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 ADGRA1Q86SQ6 560 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 ZBTB40Q9NUA8 1239 aa13.49□□□□□ -0.25
PTPN13-207ENST00000508063 ZSWIM8A7E2V4 1837 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
PTPN13-207ENST00000508063 IFIT2P09913 472 aaKnown RBP13.48□□□□□ -0.25
PTPN13-207ENST00000508063 USP5P45974 858 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
PTPN13-207ENST00000508063 SH3TC2Q8TF17 1288 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 WDR18Q9BV38 432 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 IL1RAPL2Q9NP60 686 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 PALD1Q9ULE6 856 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 CDK5RAP2Q96SN8 1893 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 CENPFP49454 3210 aa13.48□□□□□ -0.25
PTPN13-207ENST00000508063 MGAMO43451 1857 aa13.47□□□□□ -0.25
PTPN13-207ENST00000508063 EN2P19622 333 aaPredicted RBP13.47□□□□□ -0.25
PTPN13-207ENST00000508063 CTGFP29279 349 aa13.47□□□□□ -0.25
PTPN13-207ENST00000508063 GRK4P32298 578 aa13.47□□□□□ -0.25
PTPN13-207ENST00000508063 GCLCP48506 637 aaPredicted RBP13.47□□□□□ -0.25
PTPN13-207ENST00000508063 DYNLL1P63167 89 aaKnown RBP13.47□□□□□ -0.25
PTPN13-207ENST00000508063 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
PTPN13-207ENST00000508063 SH3D19Q5HYK7 790 aa13.47□□□□□ -0.25
PTPN13-207ENST00000508063 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
PTPN13-207ENST00000508063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms