RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 WASF1Q92558 559 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 RABGGTAQ92696 567 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 SPSB2Q99619 263 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 DBNDD2Q9BQY9 259 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 GBP3Q9H0R5 595 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ACBD3Q9H3P7 528 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 SLC52A2Q9HAB3 445 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ARFGAP3Q9NP61 516 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 FAM217BQ9NTX9 383 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 TUBE1Q9UJT0 475 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 AKAP2Q9Y2D5 859 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 FHOD1Q9Y613 1164 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ADAMTS7Q9UKP4 1686 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 CAMTA1Q9Y6Y1 1673 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 A0A087WZG4 1122 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 A0A1B0GVL5 298 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 GOLGA8BA8MQT2 603 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 GOLIM4O00461 696 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 URI1O94763 535 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZRANB2O95218 330 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 FMNL1O95466 1100 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 IVLP07476 585 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 IFIT1P09914 478 aaKnown RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 HSPD1P10809 573 aaKnown RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 PFKFB1P16118 471 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 TATP17735 454 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 USP46P62068 366 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 NAA30Q147X3 362 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 NOM1Q5C9Z4 860 aaKnown RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC102BQ68D86 513 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC129Q6ZRS4 1044 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 STOX1Q6ZVD7 989 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 DDX46Q7L014 1031 aaKnown RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 COPS6Q7L5N1 327 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 ARHGEF25Q86VW2 580 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 MSL3Q8N5Y2 521 aaKnown RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 GOLGA1Q92805 767 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 EXOC4Q96A65 974 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 NAA15Q9BXJ9 866 aaKnown RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 IRX2Q9BZI1 471 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 PRKD2Q9BZL6 878 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 SLC6A16Q9GZN6 736 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 TMX1Q9H3N1 280 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZNF446Q9NWS9 450 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 PSD3Q9NYI0 1048 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 TAF6LQ9Y6J9 622 aa5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 RGPD8O14715 1765 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P16-201ENST00000508037 SIPA1L3O60292 1781 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 KLF18A0A0U1RQI7 1052 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC151A5D8V7 595 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 ERICH4A6NGS2 130 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 RNF223E7ERA6 249 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 TULP2O00295 520 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 PRC1O43663 620 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 IGSF3O75054 1194 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 S1PR4O95977 384 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 GCP02774 474 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 MYL6BP14649 208 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 KCNA6P17658 529 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 MCM3P25205 808 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 LMOD1P29536 600 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 SSTR3P32745 418 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 KIF23Q02241 960 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 PPP2R3AQ06190 1150 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 NCAPHQ15003 741 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 SAFBQ15424 915 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 AMHR2Q16671 573 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 Q3C1V9 767 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 EPHA10Q5JZY3 1008 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 AXDND1Q5T1B0 1012 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 GORABQ5T7V8 394 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 RESP18Q5W5W9 173 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 CTR9Q6PD62 1173 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 UBE3BQ7Z3V4 1068 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 NUTM2AQ8IVF1 878 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 CEP112Q8N8E3 955 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 MLKLQ8NB16 471 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 ERCC4Q92889 916 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 EDC3Q96F86 508 aaKnown RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 NEUROD6Q96NK8 337 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 BAG1Q99933 345 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 LRRC2Q9BYS8 371 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 FTOQ9C0B1 505 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 C19orf44Q9H6X5 657 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 NCOA5Q9HCD5 579 aaKnown RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 CEP126Q9P2H0 1117 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 CEP131Q9UPN4 1083 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 HPSEQ9Y251 543 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 SLC27A5Q9Y2P5 690 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 PPP2R2CQ9Y2T4 447 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 CLIC4Q9Y696 253 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 V9GY48 417 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 PXDNQ92626 1479 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 MAST3O60307 1309 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZMYM6O95789 1325 aa5.68□□□□□ -1.5
HMGB3P16-201ENST00000508037 CPDO75976 1380 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 H7C1W4 665 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms