RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 MORF4L1Q9UBU8 362 aa17.34■□□□□ 0.37
DDR1-260ENST00000507533 DENND2AQ9ULE3 1009 aa17.34■□□□□ 0.37
DDR1-260ENST00000507533 COL2A1P02458 1487 aaPredicted RBP17.33■□□□□ 0.37
DDR1-260ENST00000507533 TBC1D12O60347 775 aa17.33■□□□□ 0.36
DDR1-260ENST00000507533 XRCC5P13010 732 aaKnown RBP17.33■□□□□ 0.36
DDR1-260ENST00000507533 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
DDR1-260ENST00000507533 LHX8Q68G74 356 aa17.33■□□□□ 0.36
DDR1-260ENST00000507533 TRMT44Q8IYL2 757 aaKnown RBP17.33■□□□□ 0.36
DDR1-260ENST00000507533 CDX2Q99626 313 aaPredicted RBP17.33■□□□□ 0.36
DDR1-260ENST00000507533 OSBPL5Q9H0X9 879 aaPredicted RBP17.33■□□□□ 0.36
DDR1-260ENST00000507533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.36
DDR1-260ENST00000507533 DOCK2Q92608 1830 aa17.33■□□□□ 0.36
DDR1-260ENST00000507533 PTPRFP10586 1907 aa17.32■□□□□ 0.36
DDR1-260ENST00000507533 FAM196BA6NMK8 535 aa17.32■□□□□ 0.36
DDR1-260ENST00000507533 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
DDR1-260ENST00000507533 CCND3P30281 292 aaPredicted RBP17.32■□□□□ 0.36
DDR1-260ENST00000507533 DZIP1Q86YF9 867 aaKnown RBP17.32■□□□□ 0.36
DDR1-260ENST00000507533 MAFAQ8NHW3 353 aaPredicted RBP17.32■□□□□ 0.36
DDR1-260ENST00000507533 SOCS4Q8WXH5 440 aa17.32■□□□□ 0.36
DDR1-260ENST00000507533 TBC1D2Q9BYX2 928 aa17.32■□□□□ 0.36
DDR1-260ENST00000507533 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
DDR1-260ENST00000507533 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 SEMA3EO15041 775 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 BTDP43251 543 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 PHKA1P46020 1223 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 RFX5P48382 616 aaPredicted RBP17.31■□□□□ 0.36
DDR1-260ENST00000507533 ATP2B3Q16720 1220 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 ATG9AQ7Z3C6 839 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 SLF2Q8IX21 1173 aa17.31■□□□□ 0.36
DDR1-260ENST00000507533 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
DDR1-260ENST00000507533 FAM163AQ96GL9 167 aaPredicted RBP17.31■□□□□ 0.36
DDR1-260ENST00000507533 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
DDR1-260ENST00000507533 PEX10O60683 326 aa17.3■□□□□ 0.36
DDR1-260ENST00000507533 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
DDR1-260ENST00000507533 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
DDR1-260ENST00000507533 SH3D19Q5HYK7 790 aa17.3■□□□□ 0.36
DDR1-260ENST00000507533 GPRC5AQ8NFJ5 357 aa17.3■□□□□ 0.36
DDR1-260ENST00000507533 P2RX7Q99572 595 aaKnown RBP17.3■□□□□ 0.36
DDR1-260ENST00000507533 SENP6Q9GZR1 1112 aaPredicted RBP17.3■□□□□ 0.36
DDR1-260ENST00000507533 SEMA6BQ9H3T3 888 aa17.3■□□□□ 0.36
DDR1-260ENST00000507533 AS3MTQ9HBK9 375 aa17.29■□□□□ 0.36
DDR1-260ENST00000507533 TXNRD2Q9NNW7 524 aa17.29■□□□□ 0.36
DDR1-260ENST00000507533 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
DDR1-260ENST00000507533 ABCF2Q9UG63 623 aa17.29■□□□□ 0.36
DDR1-260ENST00000507533 MAPK4P31152 587 aa17.28■□□□□ 0.36
DDR1-260ENST00000507533 CAP2P40123 477 aa17.28■□□□□ 0.36
DDR1-260ENST00000507533 RGS2P41220 211 aa17.28■□□□□ 0.36
DDR1-260ENST00000507533 CCL14Q16627 93 aa17.28■□□□□ 0.36
DDR1-260ENST00000507533 USP6NLQ92738 828 aa17.28■□□□□ 0.36
DDR1-260ENST00000507533 SYMPKQ92797 1274 aaKnown RBP17.28■□□□□ 0.36
DDR1-260ENST00000507533 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
DDR1-260ENST00000507533 PRKAG2Q9UGJ0 569 aa17.28■□□□□ 0.36
DDR1-260ENST00000507533 MYH13Q9UKX3 1938 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 PLXNB2O15031 1838 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 ATN1P54259 1190 aaPredicted RBP17.27■□□□□ 0.36
DDR1-260ENST00000507533 RHBDL3P58872 404 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 HERVK_113P62684 666 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 RRP1BQ14684 758 aaKnown RBP17.27■□□□□ 0.36
DDR1-260ENST00000507533 SPTY2D1Q68D10 685 aaPredicted RBP17.27■□□□□ 0.36
DDR1-260ENST00000507533 CCAR1Q8IX12 1150 aaKnown RBP17.27■□□□□ 0.36
DDR1-260ENST00000507533 MYLIPQ8WY64 445 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 SIL1Q9H173 461 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 TMOD4Q9NZQ9 345 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 DNAH12Q6ZR08 3092 aa17.27■□□□□ 0.36
DDR1-260ENST00000507533 PRUNE2Q8WUY3 3088 aa17.27■□□□□ 0.35
DDR1-260ENST00000507533 LOC285556D6RIA3 1793 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 GPR75-ASB3A0A0A6YYF3 556 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
DDR1-260ENST00000507533 HOXA7P31268 230 aaPredicted RBP17.26■□□□□ 0.35
DDR1-260ENST00000507533 MTMR2Q13614 643 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 SHHQ15465 462 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 Q3C1V9 767 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 MORN1Q5T089 497 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 CCDC102BQ68D86 513 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 RBPJLQ9UBG7 517 aa17.26■□□□□ 0.35
DDR1-260ENST00000507533 ZBTB22O15209 634 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 CIAO1O76071 339 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 COL9A1P20849 921 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 ADORA1P30542 326 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 BACE1P56817 501 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 GPR142Q7Z601 462 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 PLEKHH3Q7Z736 793 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 APBA2Q99767 749 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 WDR18Q9BV38 432 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 PORCNQ9H237 461 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
DDR1-260ENST00000507533 FOSL2P15408 326 aa17.24■□□□□ 0.35
DDR1-260ENST00000507533 ERVK-9P63128 1117 aa17.24■□□□□ 0.35
DDR1-260ENST00000507533 ERVK-24P63145 666 aa17.24■□□□□ 0.35
DDR1-260ENST00000507533 MECOMQ03112 1051 aa17.24■□□□□ 0.35
DDR1-260ENST00000507533 RASGRF1Q13972 1273 aa17.24■□□□□ 0.35
DDR1-260ENST00000507533 TTYH1Q9H313 450 aaPredicted RBP17.24■□□□□ 0.35
DDR1-260ENST00000507533 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
DDR1-260ENST00000507533 MYH2Q9UKX2 1941 aa17.23■□□□□ 0.35
DDR1-260ENST00000507533 RTP1P59025 263 aa17.23■□□□□ 0.35
DDR1-260ENST00000507533 C9orf50Q5SZB4 431 aa17.23■□□□□ 0.35
DDR1-260ENST00000507533 MFSD14CQ5VZR4 134 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms