RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 CLDN10P78369 228 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 PTK7Q13308 1070 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 LMBR1LQ6UX01 489 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 ANKRD18AQ8IVF6 992 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L10C9JJH3 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L12C9JPN9 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L21D6R901 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L22D6RA61 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L17D6RBQ6 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L19D6RCP7 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L20D6RJB6 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.5
CLCN3-205ENST00000506924 CSF1RP07333 972 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 ITGA6P23229 1130 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.5
CLCN3-205ENST00000506924 GPSM2P81274 684 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 USP17L24Q0WX57 530 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 ZKSCAN2Q63HK3 967 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 DPP8Q6V1X1 898 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-205ENST00000506924 ATF7IPQ6VMQ6 1270 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 KDF1Q8NAX2 398 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-205ENST00000506924 ARHGAP45Q92619 1136 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
CLCN3-205ENST00000506924 GPR101Q96P66 508 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-205ENST00000506924 NSFL1CQ9UNZ2 370 aaKnown RBP11.9□□□□□ -0.5
CLCN3-205ENST00000506924 LTBP3Q9NS15 1303 aa11.89□□□□□ -0.51
CLCN3-205ENST00000506924 SNED1Q8TER0 1413 aa11.89□□□□□ -0.51
CLCN3-205ENST00000506924 M0R2N6 131 aa11.89□□□□□ -0.51
CLCN3-205ENST00000506924 ZBTB7BO15156 539 aaPredicted RBP11.89□□□□□ -0.51
CLCN3-205ENST00000506924 AOC3Q16853 763 aa11.89□□□□□ -0.51
CLCN3-205ENST00000506924 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
CLCN3-205ENST00000506924 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
CLCN3-205ENST00000506924 CDC5LQ99459 802 aaKnown RBP11.89□□□□□ -0.51
CLCN3-205ENST00000506924 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
CLCN3-205ENST00000506924 AAASQ9NRG9 546 aa11.89□□□□□ -0.51
CLCN3-205ENST00000506924 UTYO14607 1347 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 WTIPA6NIX2 430 aaPredicted RBP11.88□□□□□ -0.51
CLCN3-205ENST00000506924 PLIN1O60240 522 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
CLCN3-205ENST00000506924 CLN3Q13286 438 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 CRTC2Q53ET0 693 aaPredicted RBP11.88□□□□□ -0.51
CLCN3-205ENST00000506924 MRPL14Q6P1L8 145 aaKnown RBP11.88□□□□□ -0.51
CLCN3-205ENST00000506924 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 PSMD1Q99460 953 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 MEIS3Q99687 375 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 RCAN3Q9UKA8 241 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 RBM19Q9Y4C8 960 aaKnown RBP11.88□□□□□ -0.51
CLCN3-205ENST00000506924 TIAM2Q8IVF5 1701 aa11.88□□□□□ -0.51
CLCN3-205ENST00000506924 SPINT1O43278 529 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 PPIP5K2O43314 1243 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 DKK1O94907 266 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-205ENST00000506924 RLBP1P12271 317 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 GPC1P35052 558 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 IGHMBP2P38935 993 aaKnown RBP11.87□□□□□ -0.51
CLCN3-205ENST00000506924 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
CLCN3-205ENST00000506924 TAF7LQ5H9L4 462 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 CCDC102BQ68D86 513 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
CLCN3-205ENST00000506924 TMC4Q7Z404 712 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 POLLQ9UGP5 575 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 COL4A5P29400 1685 aa11.87□□□□□ -0.51
CLCN3-205ENST00000506924 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
CLCN3-205ENST00000506924 INHAP05111 366 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 SCNN1DP51172 638 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 SCARF1Q14162 830 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 CCDC57Q2TAC2 916 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
CLCN3-205ENST00000506924 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 XAGE2Q96GT9 111 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 MPHOSPH8Q99549 860 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 MINPP1Q9UNW1 487 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
CLCN3-205ENST00000506924 RTL9Q8NET4 1388 aa11.86□□□□□ -0.51
CLCN3-205ENST00000506924 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 BACH1O14867 736 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-205ENST00000506924 UFL1O94874 794 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 GDF10P55107 478 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 DZIP1LQ8IYY4 767 aaKnown RBP11.85□□□□□ -0.51
CLCN3-205ENST00000506924 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 TPCN2Q8NHX9 752 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 TBC1D16Q8TBP0 767 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 JDP2Q8WYK2 163 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 ESYT1Q9BSJ8 1104 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms