RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
ITGA3-208ENST00000506437 SEMA3EO15041 775 aa13.39□□□□□ -0.27
ITGA3-208ENST00000506437 GABPB1Q06547 395 aaPredicted RBP13.39□□□□□ -0.27
ITGA3-208ENST00000506437 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
ITGA3-208ENST00000506437 GEMIN8Q9NWZ8 242 aaKnown RBP13.39□□□□□ -0.27
ITGA3-208ENST00000506437 DAGLAQ9Y4D2 1042 aa13.39□□□□□ -0.27
ITGA3-208ENST00000506437 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
ITGA3-208ENST00000506437 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
ITGA3-208ENST00000506437 NFIAQ12857 509 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 IFNL3Q8IZI9 196 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 ZNF541Q9H0D2 1346 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 CC2D2BQ6DHV5 1058 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 ZFPM1Q8IX07 1006 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 NAPBQ9H115 298 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
ITGA3-208ENST00000506437 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 ASTN2O75129 1339 aaPredicted RBP13.38□□□□□ -0.27
ITGA3-208ENST00000506437 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 USP5P45974 858 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 CT47A1Q5JQC4 288 aaPredicted RBP13.38□□□□□ -0.27
ITGA3-208ENST00000506437 DLK2Q6UY11 383 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 SUPT20HQ8NEM7 779 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
ITGA3-208ENST00000506437 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 USP17L21D6R901 530 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 HNRNPH2P55795 449 aaKnown RBP13.37□□□□□ -0.27
ITGA3-208ENST00000506437 GPATCH11Q8N954 259 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 SLC44A5Q8NCS7 719 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 DYNLL2Q96FJ2 89 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
ITGA3-208ENST00000506437 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 CRKP46108 304 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 LRRFIP1Q32MZ4 808 aaKnown RBP13.37□□□□□ -0.27
ITGA3-208ENST00000506437 STRIP1Q5VSL9 837 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 TBC1D10CQ8IV04 446 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 MCM9Q9NXL9 1143 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
ITGA3-208ENST00000506437 DDNO94850 711 aaPredicted RBP13.36□□□□□ -0.27
ITGA3-208ENST00000506437 PKP1Q13835 747 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 SPTY2D1Q68D10 685 aaPredicted RBP13.36□□□□□ -0.27
ITGA3-208ENST00000506437 PIBF1Q8WXW3 757 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 FEZ1Q99689 392 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 DDX4Q9NQI0 724 aaKnown RBP13.36□□□□□ -0.27
ITGA3-208ENST00000506437 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 FAM205AQ6ZU69 1335 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 DOCK2Q92608 1830 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 MCCP23508 829 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 TBC1D10BQ4KMP7 808 aaPredicted RBP13.36□□□□□ -0.27
ITGA3-208ENST00000506437 CDAN1Q8IWY9 1227 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 TEX11Q8IYF3 940 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 USP40Q9NVE5 1235 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 CALCOCO1Q9P1Z2 691 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 MROH7-TTC4A0A0A0MT08 1334 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 TNNT1P13805 278 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 ZGPATQ8N5A5 531 aaKnown RBP13.36□□□□□ -0.27
ITGA3-208ENST00000506437 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
ITGA3-208ENST00000506437 FER1L6Q2WGJ9 1857 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 PRPF40AO75400 957 aaKnown RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 PLCD1P51178 756 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 NCBP1Q09161 790 aaKnown RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 VEZTQ9HBM0 779 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 TCP10L2B9ZVM9 353 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 ZNF213O14771 459 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 KDM4AO75164 1064 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 GTF2A1P52655 376 aaPredicted RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 STK3Q13188 491 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 CFAP100Q494V2 611 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 CIAPIN1Q6FI81 312 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 GPT2Q8TD30 523 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 TBC1D22AQ8WUA7 517 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 DCP1AQ9NPI6 582 aaPredicted RBP13.35□□□□□ -0.27
ITGA3-208ENST00000506437 TMEM63CQ9P1W3 806 aa13.35□□□□□ -0.27
ITGA3-208ENST00000506437 B4E1Z4 1266 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 E7EWF7 191 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 TEKT1Q969V4 418 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 FZD1Q9UP38 647 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 GMPSP49915 693 aaPredicted RBP13.34□□□□□ -0.27
ITGA3-208ENST00000506437 SOGA3Q5TF21 947 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 CDC42EP5Q6NZY7 148 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
ITGA3-208ENST00000506437 NEDD4P46934 1319 aa13.34□□□□□ -0.27
ITGA3-208ENST00000506437 RHBDL3P58872 404 aa13.33□□□□□ -0.27
ITGA3-208ENST00000506437 SHROOM1Q2M3G4 852 aaPredicted RBP13.33□□□□□ -0.27
ITGA3-208ENST00000506437 FAM43BQ6ZT52 329 aaPredicted RBP13.33□□□□□ -0.27
ITGA3-208ENST00000506437 NOL10Q9BSC4 688 aaKnown RBP13.33□□□□□ -0.27
ITGA3-208ENST00000506437 DSCC1Q9BVC3 393 aa13.33□□□□□ -0.27
ITGA3-208ENST00000506437 SENP2Q9HC62 589 aa13.33□□□□□ -0.27
ITGA3-208ENST00000506437 LMBRD1Q9NUN5 540 aa13.33□□□□□ -0.27
ITGA3-208ENST00000506437 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms