RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 CCDC171Q6TFL3 1326 aa27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 BAZ2AQ9UIF9 1905 aaKnown RBP27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 FAM196BA6NMK8 535 aa27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 CHMLP26374 656 aa27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 METTL16Q86W50 562 aaKnown RBP27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 CRACR2BQ8N4Y2 399 aaPredicted RBP27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 TRIM34Q9BYJ4 488 aa27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 EPB41L4AQ9HCS5 686 aaPredicted RBP27.44■■□□□ 1.98
SPOCK1-204ENST00000505690 USP17L12C9JPN9 530 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 USP17L21D6R901 530 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 PLCD1P51178 756 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 ZNF157P51786 506 aaPredicted RBP27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 MFAP1P55081 439 aaKnown RBP27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 AMOTL1Q8IY63 956 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 IFNL3Q8IZI9 196 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 CLMNQ96JQ2 1002 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 NACAP1Q9BZK3 213 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 EHD4Q9H223 541 aa27.43■■□□□ 1.98
SPOCK1-204ENST00000505690 PHF20L1A8MW92 1017 aa27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 CYP2D6P10635 497 aa27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 TDO2P48775 406 aa27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 CYP4F22Q6NT55 531 aa27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 CTR9Q6PD62 1173 aa27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 ARPP21Q9UBL0 812 aaPredicted RBP27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 SERPINB13Q9UIV8 391 aa27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 CSADQ9Y600 493 aa27.42■■□□□ 1.98
SPOCK1-204ENST00000505690 INPP5BP32019 993 aa27.41■■□□□ 1.98
SPOCK1-204ENST00000505690 VGLL4Q14135 290 aa27.41■■□□□ 1.98
SPOCK1-204ENST00000505690 C12orf60Q5U649 245 aa27.41■■□□□ 1.98
SPOCK1-204ENST00000505690 VPS53Q5VIR6 699 aa27.41■■□□□ 1.98
SPOCK1-204ENST00000505690 RUFY2Q8WXA3 655 aa27.41■■□□□ 1.98
SPOCK1-204ENST00000505690 DNAJC18Q9H819 358 aa27.41■■□□□ 1.98
SPOCK1-204ENST00000505690 FOXP2O15409 715 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 ECE1P42892 770 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 EVX2Q03828 476 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 SBK1Q52WX2 424 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 RASAL3Q86YV0 1011 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 ZKSCAN4Q969J2 545 aaPredicted RBP27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 CCDC102AQ96A19 550 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 SLC10A4Q96EP9 437 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 CAPNS2Q96L46 248 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 RAD50Q92878 1312 aa27.4■■□□□ 1.98
SPOCK1-204ENST00000505690 CYP2D7A0A087X1C5 515 aa27.39■■□□□ 1.98
SPOCK1-204ENST00000505690 GRM1Q13255 1194 aa27.39■■□□□ 1.98
SPOCK1-204ENST00000505690 DNAJC5GQ8N7S2 189 aa27.39■■□□□ 1.98
SPOCK1-204ENST00000505690 NAPBQ9H115 298 aa27.39■■□□□ 1.98
SPOCK1-204ENST00000505690 ELP3Q9H9T3 547 aa27.39■■□□□ 1.98
SPOCK1-204ENST00000505690 SLC10A3P09131 477 aa27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 HSPD1P10809 573 aaKnown RBP27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 VEGFBP49765 207 aa27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 GABPAQ06546 454 aa27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 NOL9Q5SY16 702 aaKnown RBP27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 IL25Q9H293 177 aa27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 SNCAIPQ9Y6H5 919 aa27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 WDR33Q9C0J8 1336 aaKnown RBP27.38■■□□□ 1.97
SPOCK1-204ENST00000505690 FAM155AB1AL88 458 aaPredicted RBP27.37■■□□□ 1.97
SPOCK1-204ENST00000505690 CTNND1O60716 968 aaKnown RBP27.37■■□□□ 1.97
SPOCK1-204ENST00000505690 LAMB1P07942 1786 aa27.36■■□□□ 1.97
SPOCK1-204ENST00000505690 MINDY4BA8MYZ0 360 aa27.36■■□□□ 1.97
SPOCK1-204ENST00000505690 ALX1Q15699 326 aa27.36■■□□□ 1.97
SPOCK1-204ENST00000505690 SCYL3Q8IZE3 742 aa27.36■■□□□ 1.97
SPOCK1-204ENST00000505690 DYNLL2Q96FJ2 89 aa27.36■■□□□ 1.97
SPOCK1-204ENST00000505690 TAOK2Q9UL54 1235 aa27.36■■□□□ 1.97
SPOCK1-204ENST00000505690 SMIM22K7EJ46 135 aa27.35■■□□□ 1.97
SPOCK1-204ENST00000505690 RRP1BQ14684 758 aaKnown RBP27.35■■□□□ 1.97
SPOCK1-204ENST00000505690 TATDN1Q6P1N9 297 aa27.35■■□□□ 1.97
SPOCK1-204ENST00000505690 SWAP70Q9UH65 585 aa27.35■■□□□ 1.97
SPOCK1-204ENST00000505690 DOCK1Q14185 1865 aa27.34■■□□□ 1.97
SPOCK1-204ENST00000505690 SGSM2O43147 1006 aa27.34■■□□□ 1.97
SPOCK1-204ENST00000505690 CDC45O75419 566 aa27.34■■□□□ 1.97
SPOCK1-204ENST00000505690 SHMT1P34896 483 aa27.34■■□□□ 1.97
SPOCK1-204ENST00000505690 CAP2P40123 477 aa27.34■■□□□ 1.97
SPOCK1-204ENST00000505690 WNK4Q96J92 1243 aa27.34■■□□□ 1.97
SPOCK1-204ENST00000505690 GTF3C3Q9Y5Q9 886 aa27.34■■□□□ 1.97
SPOCK1-204ENST00000505690 SPDYE5A6NIY4 337 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 FGAP02671 866 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 NOGQ13253 232 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 SPRYD7Q5W111 196 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 C16orf86Q6ZW13 317 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 ERO1BQ86YB8 467 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 SLC44A5Q8NCS7 719 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 OPTNQ96CV9 577 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 PICK1Q9NRD5 415 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 ZMYM6O95789 1325 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 ROBO3Q96MS0 1386 aa27.33■■□□□ 1.97
SPOCK1-204ENST00000505690 PPARAQ07869 468 aa27.32■■□□□ 1.96
SPOCK1-204ENST00000505690 CNKSR2Q8WXI2 1034 aa27.32■■□□□ 1.96
SPOCK1-204ENST00000505690 DSCC1Q9BVC3 393 aa27.32■■□□□ 1.96
SPOCK1-204ENST00000505690 AOC2O75106 756 aa27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 ZBTB48P10074 688 aaPredicted RBP27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 CDK8P49336 464 aa27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 MKRN3Q13064 507 aaKnown RBP27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 CERKLQ49MI3 558 aaPredicted RBP27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 CASC1Q6TDU7 716 aa27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 OTUD5Q96G74 571 aa27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 ESYT1Q9BSJ8 1104 aa27.31■■□□□ 1.96
SPOCK1-204ENST00000505690 THSD7BQ9C0I4 1608 aa27.3■■□□□ 1.96
SPOCK1-204ENST00000505690 ATAD5Q96QE3 1844 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms