RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 SGPL1O95470 568 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 RIPK4P57078 832 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 CRIPAKQ8N1N5 446 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 TTLL11Q8NHH1 800 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 RAET1EQ8TD07 263 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 MYD88Q99836 296 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 CPA4Q9UI42 421 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 SNCAIPQ9Y6H5 919 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 COL2A1P02458 1487 aaPredicted RBP9.06□□□□□ -0.96
VCAN-206ENST00000505615 F8W031 263 aaPredicted RBP9.05□□□□□ -0.96
VCAN-206ENST00000505615 MYO1BO43795 1136 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 CETPP11597 493 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 FKBP1AP62942 108 aaKnown RBP9.05□□□□□ -0.96
VCAN-206ENST00000505615 UBXN2AP68543 259 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 PRKCZQ05513 592 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 RIC3Q7Z5B4 369 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 DIS3LQ8TF46 1054 aaKnown RBP9.05□□□□□ -0.96
VCAN-206ENST00000505615 GUCD1Q96NT3 240 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 PHAXQ9H814 394 aaKnown RBP9.05□□□□□ -0.96
VCAN-206ENST00000505615 TSHZ2Q9NRE2 1034 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 CWC25Q9NXE8 425 aaPredicted RBP9.05□□□□□ -0.96
VCAN-206ENST00000505615 ZNF70Q9UC06 446 aaPredicted RBP9.05□□□□□ -0.96
VCAN-206ENST00000505615 ZMYND8Q9ULU4 1186 aaPredicted RBP9.05□□□□□ -0.96
VCAN-206ENST00000505615 RPTORQ8N122 1335 aa9.05□□□□□ -0.96
VCAN-206ENST00000505615 SNAP23O00161 211 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 IRF6O14896 467 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
VCAN-206ENST00000505615 OATP04181 439 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 HOXD10P28358 340 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 TMPOP42166 694 aaKnown RBP9.04□□□□□ -0.96
VCAN-206ENST00000505615 MAGEA10P43363 369 aaPredicted RBP9.04□□□□□ -0.96
VCAN-206ENST00000505615 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 PUS10Q3MIT2 529 aaKnown RBP9.04□□□□□ -0.96
VCAN-206ENST00000505615 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
VCAN-206ENST00000505615 TDHQ8IZJ6 230 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 HELBQ8NG08 1087 aaPredicted RBP9.04□□□□□ -0.96
VCAN-206ENST00000505615 SPSB2Q99619 263 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 TMEM39BQ9GZU3 492 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 GABRQQ9UN88 632 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 CSADQ9Y600 493 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 PIEZO1Q92508 2521 aa9.04□□□□□ -0.96
VCAN-206ENST00000505615 MYO9BQ13459 2157 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 DNAH12Q6ZR08 3092 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 FMNL1O95466 1100 aaPredicted RBP9.03□□□□□ -0.96
VCAN-206ENST00000505615 BCRP11274 1271 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 IL1R1P14778 569 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 PPIL2Q13356 520 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 SNAPC2Q13487 334 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 MOGSQ13724 837 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 DUSP27Q5VZP5 1158 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 C15orf52Q6ZUT6 534 aaKnown RBP9.03□□□□□ -0.96
VCAN-206ENST00000505615 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 C7orf61Q8IZ16 206 aa9.03□□□□□ -0.96
VCAN-206ENST00000505615 PAWRQ96IZ0 340 aaKnown RBP9.03□□□□□ -0.96
VCAN-206ENST00000505615 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
VCAN-206ENST00000505615 TDRD3Q9H7E2 651 aaKnown RBP9.03□□□□□ -0.96
VCAN-206ENST00000505615 PAK6Q9NQU5 681 aaPredicted RBP9.03□□□□□ -0.96
VCAN-206ENST00000505615 BIN2Q9UBW5 565 aaPredicted RBP9.03□□□□□ -0.96
VCAN-206ENST00000505615 AK9Q5TCS8 1911 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 AVPP01185 164 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 INHAP05111 366 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 IGKV5-2P06315 115 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 ELNP15502 786 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 RPIAP49247 311 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 CHRNDQ07001 517 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 LMOD3Q0VAK6 560 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 ANKRD23Q86SG2 305 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 THAP11Q96EK4 314 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 DEFB118Q96PH6 123 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 ANKRD2Q9GZV1 360 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 JAG2Q9Y219 1238 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 BDP1A6H8Y1 2624 aa9.02□□□□□ -0.97
VCAN-206ENST00000505615 TCP10L2B9ZVM9 353 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 PDHXO00330 501 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 ADCY3O60266 1144 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 SYN1P17600 705 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 CAPN2P17655 700 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 IGHMBP2P38935 993 aaKnown RBP9.01□□□□□ -0.97
VCAN-206ENST00000505615 RBM5P52756 815 aaKnown RBP eCLIP9.01□□□□□ -0.97
VCAN-206ENST00000505615 FAM109BQ6ICB4 259 aaPredicted RBP9.01□□□□□ -0.97
VCAN-206ENST00000505615 TREML4Q6UXN2 200 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 ZKSCAN4Q969J2 545 aaPredicted RBP9.01□□□□□ -0.97
VCAN-206ENST00000505615 WRNIP1Q96S55 665 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 PNNQ9H307 717 aaKnown RBP9.01□□□□□ -0.97
VCAN-206ENST00000505615 TOR4AQ9NXH8 423 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 FAM205AQ6ZU69 1335 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 PLXNB2O15031 1838 aa9.01□□□□□ -0.97
VCAN-206ENST00000505615 SEMA3EO15041 775 aa9□□□□□ -0.97
VCAN-206ENST00000505615 TFRCP02786 760 aaKnown RBP9□□□□□ -0.97
VCAN-206ENST00000505615 ITGA6P23229 1130 aa9□□□□□ -0.97
VCAN-206ENST00000505615 FCGRTP55899 365 aa9□□□□□ -0.97
VCAN-206ENST00000505615 HIC1Q14526 733 aa9□□□□□ -0.97
VCAN-206ENST00000505615 MORN1Q5T089 497 aa9□□□□□ -0.97
VCAN-206ENST00000505615 NECAB2Q7Z6G3 386 aa9□□□□□ -0.97
VCAN-206ENST00000505615 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
VCAN-206ENST00000505615 GOLGA6L2Q8N9W4 650 aaPredicted RBP9□□□□□ -0.97
VCAN-206ENST00000505615 RAPGEFL1Q9UHV5 662 aa9□□□□□ -0.97
VCAN-206ENST00000505615 SERPINA10Q9UK55 444 aa9□□□□□ -0.97
VCAN-206ENST00000505615 KCNH4Q9UQ05 1017 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms